Gene Bcav_1311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1311 
Symbol 
ID7858774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1487068 
End bp1487793 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content76% 
IMG OID643865395 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002881332 
Protein GI229819806 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGGA CCATGACGAG AGGCTCGGAC GACGTCGGCG GTCGGGTGGC GCGCGGCGCG 
AAGGGGGAGC GCACGCGGAC GCGCCTGCGC GAGGCCGCGC TGACGTCGTT CCGTGAGCGC
GGCTACGACG CGACGACGAT GCGCGCCGTG GCCGCGGACG CCCAGGTGTC CGCCGGCGCC
GCGTACCAGT ACCTGTCCTC GAAGGAGGAC CTTGTCCAGG AGTTCTACGC CGCGGTGGTC
GCCGAGCAGC GTGCACGTGT CACGGCGGCG CTCGACGGCG AGCGCTCGTT CGAGGCGCGG
CTGCGGGTCG CCTGGCACGC GGTGGTCCAC GTGCTCGCCC CGTACCACGC GCACGCCGGC
GAGTTCGTCG CCGTCGGTAT CCGGCCCGGG ACTGACGCGA ACCCGTTCTC CGAGGCGTCG
GGCGCGACCC GACGCGACGC CGTGGCTCTG CTCGAGGACG TCGTCGCGGG AGCCCGACCG
GCGGTCCCGA GCGCCGTGCG CGCCCTGCTC CCGGAGGCGC TGTGGCTGGC GCAGCTCGGC
CTGACGCTGT TCTGGGTGGC GGACTCATCT CCCGGCGCGC GGCGCACGCA CGGCCTCGTC
GATGCCGCTG CGGCGCTCAC GGCCCGCGCG GTGCGGCTCG CCCGGCTGCC CGTGGCGCGT
CCCCTCATCG TCGATGCGCT CACCCTCGTC GAACGCGCGC GTCCGGCGGG CGGAGGCCGG
CCGTGA
 
Protein sequence
MLRTMTRGSD DVGGRVARGA KGERTRTRLR EAALTSFRER GYDATTMRAV AADAQVSAGA 
AYQYLSSKED LVQEFYAAVV AEQRARVTAA LDGERSFEAR LRVAWHAVVH VLAPYHAHAG
EFVAVGIRPG TDANPFSEAS GATRRDAVAL LEDVVAGARP AVPSAVRALL PEALWLAQLG
LTLFWVADSS PGARRTHGLV DAAAALTARA VRLARLPVAR PLIVDALTLV ERARPAGGGR
P