Gene Bcav_1310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1310 
Symbol 
ID7858773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1486213 
End bp1486908 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content70% 
IMG OID643865394 
Producthypothetical protein 
Protein accessionYP_002881331 
Protein GI229819805 
COG category[L] Replication, recombination and repair 
COG ID[COG1637] Predicted nuclease of the RecB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.412725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCTCG TCATCGCGAG GTGCTCGGTC GACTACACGG GGCGCCTCAC GGCGCACCTC 
CCGTTGGCGA CCCGTCTGCT GCTCGTCAAG GCCGACTCGT CGGTGCTCGT GCACTCCGAC
GGCGGCTCGT ACAAGCCGCT GAACTGGATG AGCCCCCCGT GCACGCTGCG CGTCGCGGAA
CCTGACGACG ACGACGTAGG GCGCGGTGTG CGCGAGGTGT GGACGGTCCA GAACGCGAAG
AGCGACGACC GGCTCGTCGT CCGCATCCAC GACGTCCTCT CCGACTCCTC GCACGACCTG
GGTGTCGACC CAGGCTTGGT CAAGGACGGT GTGGAGGCGC ACCTCCAGGC ACTGCTCGCG
GAGCAGATCG ACCTGCTCGG CTCGGGGCAC GTGCTGGTCC GGCGGGAGTT CCCCACGGCG
ATCGGGCCGG TGGACATCCT CGCGCGCTCC GCTGCCGGGG AGACGGTCGC CGTCGAGATC
AAACGGCGCG GGGACATCGA CGGCGTCGAG CAGCTCACGC GCTACCTGGA GCTGCTCGGG
CGGGACCCGC TGCTCGCCCC CGTGCAGGGA GTCTTCGCGG CCCAGGAGAT CAAGCCGCAG
GCGCGCGTGC TGGCGCAGGA CCGGGGCATC CGGTGTCTGG TTCTCGACTA CGACGCGATG
CGCGGGCTCG ACGACGTCGA CTCGCGGCTC TTCTGA
 
Protein sequence
MRLVIARCSV DYTGRLTAHL PLATRLLLVK ADSSVLVHSD GGSYKPLNWM SPPCTLRVAE 
PDDDDVGRGV REVWTVQNAK SDDRLVVRIH DVLSDSSHDL GVDPGLVKDG VEAHLQALLA
EQIDLLGSGH VLVRREFPTA IGPVDILARS AAGETVAVEI KRRGDIDGVE QLTRYLELLG
RDPLLAPVQG VFAAQEIKPQ ARVLAQDRGI RCLVLDYDAM RGLDDVDSRL F