Gene Bcav_1305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1305 
Symbol 
ID7858768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1481373 
End bp1483007 
Gene Length1635 bp 
Protein Length544 aa 
Translation table11 
GC content69% 
IMG OID643865389 
ProductF0F1 ATP synthase subunit alpha 
Protein accessionYP_002881326 
Protein GI229819800 
COG category[C] Energy production and conversion 
COG ID[COG0056] F0F1-type ATP synthase, alpha subunit 
TIGRFAM ID[TIGR00962] proton translocating ATP synthase, F1 alpha subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.206364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGC TCACGATCAA GCCTGAGGAG ATCCGGGCTG CGCTCGACAG CTTCGTGAAC 
TCCTACGAGC CCTCGGCGAG CGCTCGCGAA GAGGTCGGCC GCGTCACCCT CGCGGCCGAC
GGCATCGCGG AGGTCGAGGG ACTCCCCGGC GCGATGGCGA ACGAGCTGCT GCAGTTCGAG
GACGGCACCC TCGGCCTGGC GCTGAACCTC GACGTGCGCC ACATCGGTGT GGTCGTCCTC
GGCGAGTTCA CCGGCATCGA GGAGGGCCAG GAGGTCCGCC GGACGGGCGA GGTGCTCTCC
GTCCCCGTCG GCGACGGATA CCTGGGCCGG GTCGTGGACC CGCTGGGCAA CCCGATCGAC
GGCCTCGGCG ATGTCGAGAC GGAGGGACGC CGCGCCCTCG AGCTCCAGGC GCCGGGTGTC
ATGGCCCGGA AGAGCGTCCA CGAGCCGCTG CAGACCGGCA TCAAGGCGAT CGACTCGATG
ATCCCGATCG GCCGAGGCCA GCGTCAGCTG ATCATCGGCG ACCGCCAGAC GGGCAAGACG
GCGATCGCGA TCGACACGAT CCTCAACCAG AAGGCGAACT GGGACTCGGG CGACCCGAGC
AAGCAGGTCC GGTGCGTCTA CGTCGCCATC GGGCAGAAGG GCTCGACGAT CGCGTCCGTG
CGCGGCGCCC TCGAGGACGC CGGTGCGCTG GAGTACACGA CGATCGTGGC GGCACCCGCC
TCCGACCCGG CGGGCTTCAA GTACCTCGCG CCGTACACCG GTTCCGCCAT CGGCCAGCAC
TGGATGTACC AGGGCAAGCA CGTCCTCATC GTGTTCGACG ACCTGTCGAA GCAGGCCGAG
GCGTACCGCG CCGTGTCGCT GCTGCTGCGC CGTCCGCCGG GCCGTGAGGC GTACCCGGGC
GACGTGTTCT ACCTGCACTC CCGCCTGCTC GAGCGTTGTG CGAAGCTCTC CGACGAGCTC
GGCGCCGGGT CGATGACCGG CCTGCCGATC ATCGAGACGA AGGCGAACGA CGTGTCGGCG
TACATCCCGA CGAACGTCAT CTCGATCACG GACGGCCAGA TCTTCCTGCA GTCCGACCTG
TTCAACGCGA ACCAGCGCCC CGCCGTCGAC GTCGGCATCT CCGTGTCCCG CGTGGGTGGC
GACGCCCAGG TCAAGGGGAT GAAGAAGGTC TCCGGCACGC TCAAGCTCGA GCTGGCCCAG
TACCGCTCGC TCGAGGCGTT CGCGATGTTC GCCTCCGACC TGGACGCCGC CTCGCGGGCC
CAGCTCAAGA GAGGTGCGGC GCTGACGGAG CTGCTCAAGC AGCCGCAGTA CTCGCCGTTC
GCCGTCGAGG ACCAGGTCGC CATGATCTGG TCCGGGACGA ACGGCTACCT CGACGACGTC
GAGACGGCCG ACATCCACCG GTTCGAGAGC GAGCTGCTCG ACCACCTGCG CCGGCACACG
TCGGTTCTCG ACGACATCGC GTCGTCGGGC CTGCTCACGG ACGAGACCGA GGAGGCGCTG
CGCAACGGCG TCGAGTCGTT CCGCCGGACC TTTGCCGGCA GCGACGGCCA GATCATCGGC
GGCGGCGAGC CCGAGTCCGA CGGCGAGGAC GTGGACGTCG AGCAGGAGCA GATCGTCCGC
CAGAAGCGGG GCTGA
 
Protein sequence
MAELTIKPEE IRAALDSFVN SYEPSASARE EVGRVTLAAD GIAEVEGLPG AMANELLQFE 
DGTLGLALNL DVRHIGVVVL GEFTGIEEGQ EVRRTGEVLS VPVGDGYLGR VVDPLGNPID
GLGDVETEGR RALELQAPGV MARKSVHEPL QTGIKAIDSM IPIGRGQRQL IIGDRQTGKT
AIAIDTILNQ KANWDSGDPS KQVRCVYVAI GQKGSTIASV RGALEDAGAL EYTTIVAAPA
SDPAGFKYLA PYTGSAIGQH WMYQGKHVLI VFDDLSKQAE AYRAVSLLLR RPPGREAYPG
DVFYLHSRLL ERCAKLSDEL GAGSMTGLPI IETKANDVSA YIPTNVISIT DGQIFLQSDL
FNANQRPAVD VGISVSRVGG DAQVKGMKKV SGTLKLELAQ YRSLEAFAMF ASDLDAASRA
QLKRGAALTE LLKQPQYSPF AVEDQVAMIW SGTNGYLDDV ETADIHRFES ELLDHLRRHT
SVLDDIASSG LLTDETEEAL RNGVESFRRT FAGSDGQIIG GGEPESDGED VDVEQEQIVR
QKRG