Gene Bcav_1294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1294 
Symbol 
ID7858757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1469381 
End bp1470946 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content70% 
IMG OID643865378 
ProductAlkaline phosphatase 
Protein accessionYP_002881315 
Protein GI229819789 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3540] Phosphodiesterase/alkaline phosphatase D 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.455409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.583657 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGCG GCAGGAGACA GGTCAGCCGA CGTAGGTTCC TCGGATACTC CGGCGCCGGG 
GCGGCCGCCG TCATGCTCGG CACCGGCGCG TGGCAGGACA CCGAGGCCTC CGCCCACGTG
CGCGGGTACC CGTTCACGCT CGGCGTCGCA TCGGGCGATC CGCTGCCGGA CGGCGTGGTG
CTCTGGACGA GGCTCGCCGT CGACCCGCTC GCGCCGGACG GCCGCGGCGG GATGCCGAAC
AAGCAGGTCC CGGTCCAGTA CCAGGTGGCG GAGGACGAGC GCTTCCGTCG GGTGGTCCGC
TCCGGGACGG CGTTCGCGAC GCCGGAGCTC GGGCACTCCG TGCACCCGGA GATCAGCGGC
CTCCGCCCCG ACCGCGAGTA CTGGTACCGG TTTCGGGTCG GGCGGGAGCT CTCCCCGGCC
GGCCGGACGC GGACGGCGCC GGCCCCGGGG ACGATGACAC AGTCCCTGCG CTTCGCCGTC
GCCTCCTGCC AGAGCTACGA GGCCGGCTTC TACACGACGC TGCAGCACCT GGCGCAGGAG
GACCTGGACC TCGTGGTGCA CCTCGGCGAC TACATCTACG AGGAGTCCTA CGTCCCGGAG
CCGATCCTGC ACGACGGCAC GCCGATGCCC GACTACCTGC GGACGGAGTG CTTCGACCTC
GACCGCTACC GCCTGCAGTA CGCGCTGTAC AAGTCGGACC CGCACCTCCA GGCCGCCCAC
GCGATGTGCC CGTGGCTCAC GACGTTCGAC GACCACGAGG TCGAGAACGA CTGGCTCGGC
CCGCGCTCCG AGGCGGACGA CGAACCGGAC CAGGACCCCG CCGTCTTCGC ACAGCGCAAG
GCCGACGCGT TCCAGGCGAT GTACGAGAAC CTGCCCCTCC GGCACACGCA GATGCCGTCC
GGGCCGAGCA TCCGGATCCA CCGGCGCATC GGCTACGGCA CGCTCGCGGA CTTCACGATG
CTCGACTCCC GCCAGTACCG CTCCGAGCGC GGGCGGGACA ACCCCGACGC CACGATGCTC
GGCGGCGCGC AGCGCGACTG GCTCGTCGAC GGCTTCTCCT CGTCCGAGGC CACGTGGCAG
GTCATCGGCA ACCAGCAGCC GATGGCGCAG CTCGACCGCG ACCCCGACCC GGAGAAGATC
TCCTACTACG GCGTCTGGGA CAACTACAAC GTCGAGCGCG AGCACGTGCT CACCCAGGCG
CACGAGCGTG GCGTCGACAA CCTCGTCGTC GTCACCGGCG ACCGCCACAA CAACTACTTC
ATGGAGCTCA AGGCGGACTA CGCCGACCCC GACTCCCCGG TGATCGGCAC GGAGATCGTC
GGCACCTCGC TCGCCAGCGG ACGCGACGGC GCCGACATGC TGCCCATCGG CGAGGTCTAC
CTCGCCGAGA ACCCGCACAT GAAGTTCTGC AACTTCCAGC GCGGCTACAA CGTCGTGACT
CTCACGCCCG ACACGATGAG GTCCGACTAC CGCGTCGTGC CCTACATCTC GCAGCCCGGC
GCGCCGATCA GCACCCGTGC CAGCTTCGTC GTCGAGGACG GCGTCCCCGG AGGTGTCAGT
GCCTGA
 
Protein sequence
MAGGRRQVSR RRFLGYSGAG AAAVMLGTGA WQDTEASAHV RGYPFTLGVA SGDPLPDGVV 
LWTRLAVDPL APDGRGGMPN KQVPVQYQVA EDERFRRVVR SGTAFATPEL GHSVHPEISG
LRPDREYWYR FRVGRELSPA GRTRTAPAPG TMTQSLRFAV ASCQSYEAGF YTTLQHLAQE
DLDLVVHLGD YIYEESYVPE PILHDGTPMP DYLRTECFDL DRYRLQYALY KSDPHLQAAH
AMCPWLTTFD DHEVENDWLG PRSEADDEPD QDPAVFAQRK ADAFQAMYEN LPLRHTQMPS
GPSIRIHRRI GYGTLADFTM LDSRQYRSER GRDNPDATML GGAQRDWLVD GFSSSEATWQ
VIGNQQPMAQ LDRDPDPEKI SYYGVWDNYN VEREHVLTQA HERGVDNLVV VTGDRHNNYF
MELKADYADP DSPVIGTEIV GTSLASGRDG ADMLPIGEVY LAENPHMKFC NFQRGYNVVT
LTPDTMRSDY RVVPYISQPG APISTRASFV VEDGVPGGVS A