Gene Bcav_1289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1289 
Symbol 
ID7858752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1464883 
End bp1465899 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content75% 
IMG OID643865374 
ProductSua5/YciO/YrdC/YwlC family protein 
Protein accessionYP_002881311 
Protein GI229819785 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.52734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCTGC TCGACTGCAC CGACCCCGAC AACCGGGAGA AGAGTCTCGA CGCTGCCGTC 
GAGGCCGTCA CGCACGGTGG ACTCATCGTG CTGCCGACCG ACACCGTGTA CGGCATCGCT
GCCGACGCGT TCGACAAGGA CGCCGTGGCC GCCCTGCTCG CCGCGAAGGG GAGGGGCCGT
CAGAAGCCAC CGCCGGTGCT GGTCGGCGAC CACTCCACGC TCGACGGTCT CGCGACCGAC
GTGCCCGAGG TCGTCCGCAC ACTGATCGAA CGCTTCTGGC CCGGCGCCCT GACGATCATC
GTGCGCGCCC AGCCGTCACT GACCTGGGAC CTCGGGTACA CCCGCGGCAC CGTCGCCCTG
CGGATGCCCG ACGACGAGAT CGCGCTCGAC GTCCTGCGGC GTACGGGCCC TCTCGCCACG
TCCAGCGCGA ACCGCACCGG CCGACCGGCC GCGACCACGG CCGCCGAGGC GCAGGAGCAG
CTCGGAGCCC GGGTCGGCGT GTACCTCGAC GGCGGCCCGG CGCGCGGCGG CGAGGCCTCC
ACGATCATCG ACGCGACCGG CCCGACGCTG AGCATCGTCC GCGAGGGGGC GCTGAGCGTC
GAGGTGCTCG GTGAGGTGGC ACCCGAGCTC CTGCCGCCCC CGCCCGAGGA CGAGACCACC
GCTGACGGCG AGCAGCCGGC TGCGGACGTC GAGCAGCCGG ACGGCGAGAC CGCCGCCGCG
CCGGACGGCG AGACCGCCGC CGATGCCCCC AGCGCCGGCG AGACCGCCAC GGACGAGGCC
GCCGACGAGC CCGCAGACGT CGAGCCCGCC ACCGACGAGG CCGCAGCGGC GGTGGAGCCG
ATGGAGGCTG CCGCGCCCGG CGAGATCGCC GAGAGCGCGC GTGAGGACGT CGAGCCGGTC
GACCCGACGG ACCCGCCCCA GGAGCAGATC GAGGCCGCCG GGCCGATCGC GCCGCTGCCG
CCCGAGGCGG TGGATGCCGA GCCGGTGACG CGGGACGGCG GTGACCACGA CCGGTGA
 
Protein sequence
MTLLDCTDPD NREKSLDAAV EAVTHGGLIV LPTDTVYGIA ADAFDKDAVA ALLAAKGRGR 
QKPPPVLVGD HSTLDGLATD VPEVVRTLIE RFWPGALTII VRAQPSLTWD LGYTRGTVAL
RMPDDEIALD VLRRTGPLAT SSANRTGRPA ATTAAEAQEQ LGARVGVYLD GGPARGGEAS
TIIDATGPTL SIVREGALSV EVLGEVAPEL LPPPPEDETT ADGEQPAADV EQPDGETAAA
PDGETAADAP SAGETATDEA ADEPADVEPA TDEAAAAVEP MEAAAPGEIA ESAREDVEPV
DPTDPPQEQI EAAGPIAPLP PEAVDAEPVT RDGGDHDR