| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1284 |
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| Symbol | |
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| ID | 7858747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 1459989 |
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| End bp | 1461926 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643865369 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_002881306 |
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| Protein GI | 229819780 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.287408 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGACA CCATCGACAC CGCCGCTCAG GCCGCCGGCG CGGCCCGCGG CGGGTCCCTG
ACTGCCATGC GCCTCGCAGA GCTGCAGCAG CTCGCAGGCA GCATGGGCAT CTCCGGGACG
TCCAAGATGC GCAAGAACGA CCTCGTCGCA GCGATCCGTG AGGCCCGCGC CGGCTCCGCC
GCGCCCGCCC GCGCCCCGCG CGCGAAGCGG CCCGCCGCTG ACGAGGCCGC GCCGACGCCG
CCCCAGCCGA CCACGCACGC CCCGGCCGCC GCGCCCGCGG CCGCCCTCGA GGCCCCGCGC
GCCGCCGGAG CCAGCGCGAC GGTCACCGAG CGACCGGCCC GCCAGCCCGA GCGCGAGAGC
GCGCCTGAGC GGGACGTGCC CGCCCGGGAC GTGCCCGCCC GGGACGCCGG CAAGCGCGCT
GCACGGTCCG GCGGCGAGGA ACGCCGTCGT TCGCTCGACG ACATCACGTT CCCCGAGCCG
CGCCACGACG GCGACGGCGA GGGCCGCAAC GGGCAGGGTG GCGAGCGCAA CGGCCAGCGC
CCCGCCCGTA CCGGCGGCGA GCGCCGCGAC GACGCGACCG GCGAGCGGCG TGCGGCGAGC
GTCGAGCGGA GCAGCGACCG GGCGACCGCG GACCGCGGCG CCGACCGGGG CGGCTTCGAC
GACGACGAGC GCGGCGGCCG GCGTCGTCGC GGCCGCGACC GCTACCGCGA CCGCAAGCGC
CGGGGCGGCG GGCGCGGCGA GCAGGCGCAG TACGAGGAGG TCGAGGTCAC CGAGGACGAC
GTCCTGCTCC CCGTCGCGGG CGTGCTCGAC ATCCTCGACA ACTACGCGTT CGTCCGCACC
AGCGGGTACC TGCCCGGCCC CGGCGACGTC TACGTCTCGC TGGGCCAGGT GAAGAAGCAC
GGTCTGCGCC GCGGTGACGC GGTCACCGGC GCCGTGCGGC AGCCGCAGGA CGGCGAGCAG
CAGGGGCAGC GGCAGAAGTT CAACGCGCTC GTGCGGCTCG ACTCCGTCAA CGGCATGGAC
GTCGAGCGGG CCCGGAGCCG CCCGGACTTC ATGAAGCTGA CGCCCCTGTA CCCGCAGGAG
CGGCTGCGCC TCGAGACGAC GCCGACGGCC ATCACCGCGC GCATCATCGA CCTCGTCGCG
CCGATCGGCA AGGGTCAGCG CGGCCTCATC GTCGCGCCGC CCAAGGCCGG CAAGACGATC
ATGATGCAGC AGATCGCCAA CGCGATCACG ACGAACAGCC CCGACGTGCA CCTCATGGTC
GTGCTCGTGG ACGAGCGTCC CGAGGAGGTC ACCGACTGGG AGCGCACCGT GAAGGGCGAG
GTCATCTCCT CGACCTTCGA CCGCCCGGCG TCCGACCACA CGATGGTCGC CGAGCTCGCG
ATCGAGCGGG CGAAGCGACT CGTCGAGCTG GGGCAGGACG TGATCGTGCT GCTCGACAAC
ATGACGCGCC TGTCGCGGGC GTACAACCTC GCGGCGCCGG CGTCCGGCCG CATCCTGTCC
GGTGGTGTCG ACGCCTCGGC GCTGTACCCG CCGAAGAAGT TCTTCGGCGC GGCGCGCAAC
ATCGAGAACG GCGGCTCCCT GACGATCCTC GCCTCGGCGC TCATCGAGAC CGGGTCCAAG
ATGGACGAGG TCATCTTCGA GGAGTTCAAG GGCACCGGGA ACATGGAGCT GCGGCTCGCC
CGGTCGCTCG CCGAGAAGCG GATCTTCCCG GCGATCGACG TCAACGCGTC GGGCACGCGC
CGCGAGGAGA TCCTCATCCC GGGCGACGAG CTCAAGATCA TCTGGAAGCT GCGCCGCGTC
ATGGGGGCGC TCGACCAGCT GCCGGCTCTC GAGCTGCTGC TCGGCAAGGT CCGGGAGATC
CCGACGAACG CCGAGTTCCT CATGACCGTG CAGAAGACGA CGCCGACGGT CCCCGGCCAG
ACGAACGAGC TGGTCTGA
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| Protein sequence | MTDTIDTAAQ AAGAARGGSL TAMRLAELQQ LAGSMGISGT SKMRKNDLVA AIREARAGSA
APARAPRAKR PAADEAAPTP PQPTTHAPAA APAAALEAPR AAGASATVTE RPARQPERES
APERDVPARD VPARDAGKRA ARSGGEERRR SLDDITFPEP RHDGDGEGRN GQGGERNGQR
PARTGGERRD DATGERRAAS VERSSDRATA DRGADRGGFD DDERGGRRRR GRDRYRDRKR
RGGGRGEQAQ YEEVEVTEDD VLLPVAGVLD ILDNYAFVRT SGYLPGPGDV YVSLGQVKKH
GLRRGDAVTG AVRQPQDGEQ QGQRQKFNAL VRLDSVNGMD VERARSRPDF MKLTPLYPQE
RLRLETTPTA ITARIIDLVA PIGKGQRGLI VAPPKAGKTI MMQQIANAIT TNSPDVHLMV
VLVDERPEEV TDWERTVKGE VISSTFDRPA SDHTMVAELA IERAKRLVEL GQDVIVLLDN
MTRLSRAYNL AAPASGRILS GGVDASALYP PKKFFGAARN IENGGSLTIL ASALIETGSK
MDEVIFEEFK GTGNMELRLA RSLAEKRIFP AIDVNASGTR REEILIPGDE LKIIWKLRRV
MGALDQLPAL ELLLGKVREI PTNAEFLMTV QKTTPTVPGQ TNELV
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