| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1282 |
|---|
| Symbol | |
|---|
| ID | 7858745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 1457657 |
|---|
| End bp | 1458718 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643865367 |
|---|
| Product | threonine synthase |
|---|
| Protein accession | YP_002881304 |
|---|
| Protein GI | 229819778 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0498] Threonine synthase |
|---|
| TIGRFAM ID | [TIGR00260] threonine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.209193 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCAGC CGTGGCGCGG CATCATCGCC GAGTACGCCG AGTACCTGCC CCTCGCCGAC
GGCGATCCCG TCGTGACGCT GGGCGAGGGC GGCACGCCGC TGGTCGAGGC TCCGGCGCTG
TCGGCGCGGA CGGGCGCCCG CGTGTACCTC AAGGTCGAGG GGGCCAACCC GACCGGCTCG
TTCAAGGACC GCGGCATGGC CGTCGCGATC TCCAAGGTCG TGGCGGCGGG GTCGCCGACG
GTCGTCTGCG CCTCGACGGG CAACACGTCC GCCTCCGCCG CCGCCTACGC CGCGCGCGCG
GGCCTCGCCT GCGCCGTCGT CCTGCCCGCC GGGAAGATCG CGGCGGGCAA GCTCGCCCAG
GCGATCGTGC ACGGCGCCAC GCTCGTGGCC GTCGACGGGA ACTTCGACGA CTGCCTGACG
ATCGTGCGGG AGCTCGCCGC GAGCGACGCC GTCGCCCTGG TGAACTCGGT CAACCCGTAC
CGCCTCCAGG GGCAGAAGAC GGCGGCGTTC GAGATCGTCG ACACGCTCGG CGACGCTCCG
GCCGTCCACG TGCTCCCGGT CGGCAACGCA GGCAACATCT CGGCCTACTG GATGGGCTAC
CGCGAGTACG CCGCCGCCGG CCGCGCGAAC CGGACGCCCG TGATGTGGGG CGTGCAGGCG
GAGGGCGCGG CGCCGTTCGT CAAGGGTGAG CCGGTCGAGC ATCCCGAGAC GGTCGCGACG
GCGATCCGGA TCGGCAACCC GGCCTCGTGG GACCTCGCCG TCGCCGCGCG GGACGAGAGC
GGGGGCCGCA TCGACGCCGT CAGCGACGCC GAGATCCTCG ACGCGCAGGC GCTGATCGCG
CGCGAGGTCG GGGTGTTCGT CGAACCGGCG TCGGCCGCGT CGGTGGCCGG ACTGCTCGCC
CGCGCGCGGG CCGGTGACGT GCCGGAGAGT GCCACCATCG TGTGCACGGT CACGGGGAAC
GGGTTGAAGG ACACGGCGAC GGCGCTCGGG GACACGCCGA TCGCACCGGT GAGCGTGTCC
GCGCGAACGG CCGACGTCGC GCGGGTGCTC GGGCTGGACT GA
|
|---|
| Protein sequence | MAQPWRGIIA EYAEYLPLAD GDPVVTLGEG GTPLVEAPAL SARTGARVYL KVEGANPTGS
FKDRGMAVAI SKVVAAGSPT VVCASTGNTS ASAAAYAARA GLACAVVLPA GKIAAGKLAQ
AIVHGATLVA VDGNFDDCLT IVRELAASDA VALVNSVNPY RLQGQKTAAF EIVDTLGDAP
AVHVLPVGNA GNISAYWMGY REYAAAGRAN RTPVMWGVQA EGAAPFVKGE PVEHPETVAT
AIRIGNPASW DLAVAARDES GGRIDAVSDA EILDAQALIA REVGVFVEPA SAASVAGLLA
RARAGDVPES ATIVCTVTGN GLKDTATALG DTPIAPVSVS ARTADVARVL GLD
|
|---|
| |