Gene Bcav_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1278 
Symbol 
ID7858740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1452338 
End bp1453261 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content73% 
IMG OID643865362 
ProductAldose 1-epimerase 
Protein accessionYP_002881300 
Protein GI229819774 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2017] Galactose mutarotase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.265427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.286232 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG TCCAGACGCC GTCAGGCGAG CAGTACATCC TGCGCGATCC CGCGTCCGAC 
GCCGTCGCCG TCGTCACCGA GGTCGGCGCC ACCCTGCGGT CCTTCAGCGT GGGTGGCCGC
GACGTGATCA GCTCGTTCGC CGCCGACCGG GTCGCTCCCG CCTCGCACGG TGCCGTGCTC
GTGCCGTGGC CGAACCGCAT CCGCGACGGT CGCTACTCCT TCGACGGCGT CACCTACCAG
CTCCCGCTCA CGGAGCCGGC CCGCGGCACC GCGCTGCACG GGCTCGTCAA CTGGCAGCGC
TGGCGCGTCG TGACGTGGGA GGAGCAGGAG GTCCGGCTCG CGATCGACCC GCCGCCGATC
CCCGGCTACC CGTTCGGCCT GCACGTCGAG ATCGGGTACC GCCTGTCGGG CCAGGGCCTG
GAGATCGAGC TCGTCACCAC GAACACCGGC ACGCACGCCG CGCCGTACGG CGTCGGCTTC
CATCCCTGGC TCTCGCCCGG CCCGGACCCG CTCGACGTCG CCACGCTGTC GCTGGACGCG
ACGGGATGGG TCCGGCCCGA CGACCGACTG CTCCCGACCG GCGTCGAGGA CCTGCCTGAG
CACCTGGACT TCCGGAACCC GCGCGAGCTC GGCGACGTCG TCATCGACGA CGCGTTCACC
GGCGCGACCC GGGACGACGA CGGGCTGTCC TGGATCCGGC TCACGGGCCG CGACGGCCGG
ACCGCCGCCG TCTGGATGGA CGAGTCGCTG TGCTGCTGGC AGATGTGCAC GGGCGACGAG
GTCGCCGACG TCGCGCTCCG CCGCTCCGGG ATCGCCGCCG AGCCGATGAC GTGCGTCGCC
GACGCGTTCA ACACCGGGGA CGACCTGGTC CGGCTCGAGC CGGGAGCGGA GCACCGCGTC
CGGTGGGGAC TGCGGCTCGA CTGA
 
Protein sequence
MSTVQTPSGE QYILRDPASD AVAVVTEVGA TLRSFSVGGR DVISSFAADR VAPASHGAVL 
VPWPNRIRDG RYSFDGVTYQ LPLTEPARGT ALHGLVNWQR WRVVTWEEQE VRLAIDPPPI
PGYPFGLHVE IGYRLSGQGL EIELVTTNTG THAAPYGVGF HPWLSPGPDP LDVATLSLDA
TGWVRPDDRL LPTGVEDLPE HLDFRNPREL GDVVIDDAFT GATRDDDGLS WIRLTGRDGR
TAAVWMDESL CCWQMCTGDE VADVALRRSG IAAEPMTCVA DAFNTGDDLV RLEPGAEHRV
RWGLRLD