Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1272 |
Symbol | |
ID | 7859583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 1441303 |
End bp | 1444206 |
Gene Length | 2904 bp |
Protein Length | 967 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 643865356 |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_002881294 |
Protein GI | 229819768 |
COG category | [R] General function prediction only |
COG ID | [COG3899] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.47802 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.275164 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGACCG AGACCGCCAG CTTCACCGCG CGCGAGGCCG AGCTCGAGCG CCTGTCCGCC GCGCTCGAGA CGGCTCGGCA GGGTGTCGCG AACGCCGTCG TGCTGGGAGG CGACGCCGGG GTCGGCAAGT CCCGGCTCGT GGAACGCGCC GGAGAGGCCG CGAGCGAGGC CGGCGCGCTC GTCGTCGTCG GGCACTGCCT CGATCTCGGC GACGTCGGGC TCCCCTACCT CCCGATCGTG GAGGCGCTCG GGCGCCTGCG GTCGTGCAGC GACGCCATCG ACGAGGTGAT CGAGCGCCGC CCCGCGCTCG CCCGCCTGCT CGACGGCGGA GGGGACGCCG TCACGGGCAA CGACGAGCTC GGGCGGATGC AGCTGTTCGA CGCGATCGCC GCGGCGCTGG CCGCCGTCGG CACCGCCGAG GCGCCCCTGA TGCTCGTCAT CGAGGACCTG CACTGGGCGG ACGCGTCGAC GCGCGACGTC CTGCGGTACC TGCTCGCGCG GATGCGCAAC GAGCACCTGC TGGTGCTCGC GACGTACCGT GCCGACGACC TCCACCGCCG GCACCCCTGG CGCGCCGCGC TCGCTGAGCT GCACCGCCAC CCGCGCGTGG ACCACGTGGT GCTCGAGCCG TTCTCACCCG AGGAGCTGCG GGAGTTCGCC GTCGCGGTGA CCGGCGCCCC GCTCGACGAG GTCACCCAGC GCCGGGTGCT CAAGAGGTCG GAGGGCAACG CCTACTTCGC GGAGGAGCTG CTCGCGGCGG GGCCAGACGC GGGAACGTTG CCGTGGTCGC TCGCCGACGT CCTGCACGTG CGCCTCGAAC GCCTGAGCCC GGCGGCGCTC CAGCTCGCGC GCATCGCCGC CGTCGCCGGC CGCCGGTGCT CCGAACCGCT GCTGTGGGCG GTGACCCGGC GGCGCGGCGC GTTCGAGAGC CCGGCGGCGT TCGACGAGGC GCTCCGCGAG TGCCTCGCAC ACCAGGTGCT CGAGCGCGAC GGCGACCTCC TCGCGTTCCG GCACGCCCTG CTGGCGGAGG CCGTGTACGC CGACCTGCTG CCGGGCGAGC TCGTCGCGCT GCACGCGGCG TACGCCGCCG TGATGCTCGA GGAGGACTCG CTCGGCTCGT CGGCGCAGGT GGCCCACCAC GCGATGCTCG GCCACGACGC CGCGACGGCG CTCACGGCGT CGCGGCGAGC AGCGGCCGAC GCCGCCGCCG TGTTCGCCAT CCAGGAGGAG CTGCGCCACC TCGAGGCGGT GCTCGGCACC TGGGAGTCCG TCCCGGACGC CGCGGAGCTC CTCGGCGAGG ACCTCACGGA CGTGACGCTC GCCGCCGCCG CGGCGGCCGG GCGCGCCGGT CTGAGCGACC GCGCACTGGG GCTGGCCCGC ACGGCGATCG CGGCGGCGGC CCCCGACGAC CTGCGCCAGG CCCGGCTCGG CTACCTCCTC GCACACCACC TCCTCGTCGC GTACGACACG CGCGAGGCGC TGGAGGAAAC GGGGAAGGCC CTCGCCGTCC TCGAGGGCGA CGGTCCCTCG CCCGCGCGGG CGTGGACCTG GGCGGCGCGG GCGCGGGCAG CCGTGAACAT CGACGAGGAC GACATCGCGC ACGAGGCCGC GCTCCGGGCG GTGGACGAGG CGCAGGCGCT GGACGTGCCG GACGCCGAGG CCGACGCGCT GACGACGCTC GCCGTGCTGG AGGTCGACGA CGCCGACCGT TCGGCGCGCC TGCTCGCGAA GGCTCACGAG CGCGCTCGCG CGTCCGGCGA CCTGTTCACC GCGCTGCGGG CGCGCTACAA CCTCGCGACG AACCGCTTCT ACGCCGGCGA GCTCGCCGAC GCCGACGAGC TCGCGACGAC GGCGCTGAGC GCGGCGCGGG AGAGCGGCTT CGGCTGGAGC CTGTACGCCG TGCAGCTCCT CGTCCTCGAG GAGATCATCC GGTTCACCAC CGGCGACCTC ACGCCGCAGG CGGACGAGGC GGACGAGCCG GAGTCCATGC TGCTGGGCTA CCGCGCCGCC GGCCTCTACG CGGCCGTCGC GCGCGGCGAC GCGGACGCCA TCGAACGGTG CCGGCGGCTC CTGGACGAGG AGGACCTCGA CGGCCAGCTC CTGCTGTTCG CCGGCGGCAA CCTCATCGAC GCCCTGACGT GGGCCGGCCG CCCGGAGGAG GCGGCCGACG TCGCGGCGGC CACGATCGAG GCGCTCGCCG CGACGTGGTC GGAGTTCTTC CTCGGCAGCA TCTTCCTCGC CGCCCTCGGG CTCGCCGCAC TCGCGGACCT CGCGGTCCGG GCGCGGTCGC GAGGCGACGA CGCAGCCGAG CTCCTCCAGC GCGGTGACGA GCTGCTGCGC CGGGCCGAGA CGGCTGCCGA GCGCGGCCGG CCCCGGGGCG GCGTGCTCGG CCCGGAGGGT CGCTCCTGGC TCGCCCGCAC CCGCGCGGAG CACTCCCGGC TTCACGGCGA GCACAACCCG GAGGTCTGGC GGGTCTGCGT CACGGAGTTC TCCTACGGCC ACGTCCCGGA GCTAGCGCGT AGCAGGTGGC GCCTGGCGGA GGCCCTCGTG GGCGCTGGCG AGCGCGAGGA GGCGGGCGCC GTCGTCACCG AGGCGCTCCG GGCGGCCACC GAGATGGGCG CGCGCCCGCT GGAGCGGGCG ATCCGCGACT TCGGCCGGCG CGCCCGGCTG GCCGTGCCGG GCGTGCGTCT CGAGACGTCC GGTGTGCTCA CCGACCGCGA ACGGGACGTC CTGCGCCTCG TCGCCGACGG GCTCTCGAAC CGGCAGATCG GCGAGCGGCT GTACATCAGC CCCAAGACCG TCAGCGTGCA CATCTCGAAC CTGCTCGCGA AGCTCGGCGT CGCCCGGCGC GCAGAGGCCG TCGACGTCGC GCACCGGCGT GGGCTGCTGG AGGGCGCGCG ATAG
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Protein sequence | MPTETASFTA REAELERLSA ALETARQGVA NAVVLGGDAG VGKSRLVERA GEAASEAGAL VVVGHCLDLG DVGLPYLPIV EALGRLRSCS DAIDEVIERR PALARLLDGG GDAVTGNDEL GRMQLFDAIA AALAAVGTAE APLMLVIEDL HWADASTRDV LRYLLARMRN EHLLVLATYR ADDLHRRHPW RAALAELHRH PRVDHVVLEP FSPEELREFA VAVTGAPLDE VTQRRVLKRS EGNAYFAEEL LAAGPDAGTL PWSLADVLHV RLERLSPAAL QLARIAAVAG RRCSEPLLWA VTRRRGAFES PAAFDEALRE CLAHQVLERD GDLLAFRHAL LAEAVYADLL PGELVALHAA YAAVMLEEDS LGSSAQVAHH AMLGHDAATA LTASRRAAAD AAAVFAIQEE LRHLEAVLGT WESVPDAAEL LGEDLTDVTL AAAAAAGRAG LSDRALGLAR TAIAAAAPDD LRQARLGYLL AHHLLVAYDT REALEETGKA LAVLEGDGPS PARAWTWAAR ARAAVNIDED DIAHEAALRA VDEAQALDVP DAEADALTTL AVLEVDDADR SARLLAKAHE RARASGDLFT ALRARYNLAT NRFYAGELAD ADELATTALS AARESGFGWS LYAVQLLVLE EIIRFTTGDL TPQADEADEP ESMLLGYRAA GLYAAVARGD ADAIERCRRL LDEEDLDGQL LLFAGGNLID ALTWAGRPEE AADVAAATIE ALAATWSEFF LGSIFLAALG LAALADLAVR ARSRGDDAAE LLQRGDELLR RAETAAERGR PRGGVLGPEG RSWLARTRAE HSRLHGEHNP EVWRVCVTEF SYGHVPELAR SRWRLAEALV GAGEREEAGA VVTEALRAAT EMGARPLERA IRDFGRRARL AVPGVRLETS GVLTDRERDV LRLVADGLSN RQIGERLYIS PKTVSVHISN LLAKLGVARR AEAVDVAHRR GLLEGAR
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