Gene Bcav_1264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1264 
Symbol 
ID7859575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1435454 
End bp1436125 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content76% 
IMG OID643865348 
ProductDoxX family protein 
Protein accessionYP_002881286 
Protein GI229819760 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.157094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.163775 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCC TGCGTCGCGT AGCCCGACCC CTGCTCGCGT CCGCGTTCAT CGCCGACGGG 
ATCGACGCCG TCGTGCACCC CGACGCGCAC ACCGGGGCGC TGCGCGACCT CGAACCACAG
CTGGCGAAGG CGTCCGACGG CGTCCCGCTC CTCCCGAAGG ACGCGCGGAC GATCGTGCGG
ATCTCCGGGG CGGTCACGGC GACCTCCGGG GTCCTGCTCG CCGCCGGGAT CGCTCCGCGC
GTCGCCGCCG GCGTCCTCGC CGCCGTGCAG GTGCCGACGA TCCTGCTGGT CAACCCGTTC
TGGGCGGCCC GGGGCGAGGA GCGCAAGACG TACCTGCGCG GTGCGCTGCG CGGGGCGAGC
CTGCTCGGTG GCCTGCTCCT CGCCACGGCC GACACGGCGG GCAAGCCGTC GCTCGCGTGG
CGCTGGGAGC ACTCGCGGGC CGAGGCGGCC AAGCACAAGG CGGAGCTCGA GAAGGTCCGC
GAGCAGGTGA CCCGCCGGCA GGCGCGCGCC CATCACGTGC GGCGCGGGAT CTCCGACGCC
GCGTCGGAGG TCCGGCACAC CACGCACGAC GTCGCCGACG CGGCGAAGGA CACCGCGCGC
TACGCGCGGA AGGCGGCGAA GCGCCGCGCC GACGACGTCG GCCGCGCCCT GCACGACGCC
CTTCCGGGCT GA
 
Protein sequence
MTVLRRVARP LLASAFIADG IDAVVHPDAH TGALRDLEPQ LAKASDGVPL LPKDARTIVR 
ISGAVTATSG VLLAAGIAPR VAAGVLAAVQ VPTILLVNPF WAARGEERKT YLRGALRGAS
LLGGLLLATA DTAGKPSLAW RWEHSRAEAA KHKAELEKVR EQVTRRQARA HHVRRGISDA
ASEVRHTTHD VADAAKDTAR YARKAAKRRA DDVGRALHDA LPG