| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1252 |
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| Symbol | |
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| ID | 7859563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 1423642 |
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| End bp | 1426701 |
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| Gene Length | 3060 bp |
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| Protein Length | 1019 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643865336 |
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| Product | Endo-1,4-beta-xylanase |
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| Protein accession | YP_002881274 |
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| Protein GI | 229819748 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.104467 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCTCG CCCGACGAAT CGAAACTATC GGAACCAGCC TGCTGGCCTT GGTCCTCGTG
ACCGGCACGG CGAGCCTCGG GAACGCCGTC GGCGCGCCGC CCCCTGAACC AGCCGCGCCG
GCGCAGGCCG TCGTGACATC CGACTTCGAG GACGGCACCA CGCAGGGCTG GTCGGGCCGA
GGTAGCGCGA GCGTCGCCGT CACCGCCGAC GCCGCCCATG ACGGCGCGGC GAGCCTGCTC
GTGACGGGCC GGACCCAGGC GTGGAACGGC GCATCCCTCG ACGTCACCTC CGCGTTCGAG
GCGGGGACCA CCTACGGCGT CGACCTCTGG CTCCGCCTCG CCACGGGCGC GGAGCCGACC
GACCTGCGCG TCAGTGTCCA GCGTGACGCC GGGGGCTCCT CGATCTTCGA CACGGTCGCG
ACCGTCTCCG CCACGGCCGA TGCGTGGGTC CAGGTCGCGG CCGAGTACAC GATGCCCGCA
GCAGCCGAGG CCACCCAGCT GTACGTCGAG TCGACCGGGT CTCTCACGGA CTTCCTGCTC
GACGGCGTCG TCGTGACCGG GGAGGAGGTG CCGCCGGTGC AGGAGGACAT CCCGCCGTTG
CGCGACGTCC TGGCTGGCGA CTTCGGCATC GGCGTCGCCA TCGACGCACG CGAGACGACT
GGCGCGTCGG CCCAGCTTCT GACGCGCCAC TTCGGGCAGA TCACCGCCGA GAACGCGATG
AAGCCCGAGT CCATCCAGCC GACGGAGGGT GAGTTCACGT TCGAGGCGGC TGACGCGCTC
GTCGCGTTCG CGCAGCAGAA CGATCTGCGC GTCTACGGGC ACACGCTCGT GTGGCACAGC
CAGACCCCGG AGTGGTTCTT CGCCCGCGCC GACGGTACGC CGCTCACGAG CAGCCCAGAG
GACCAGGCGA TCCTGCTCGG CCGGATGGAG GCCCACATCA CGGCCATGGG CGAGCGTTTC
GGCGACGCCG CGTGGGCGTG GGACGTCGTC AACGAGGCGA TCGACGAGAG CCAGCCCGAC
GGGCTGCGCC GCAGCCGCTG GTACGAGGTG CTCGGTCCCG ACTACCTCAC CCATGCGTTC
CGTTTCGCGG ACGCGGCGTT CCCGGACGCG CAGCTCTTCC TCAACGACTA CAACACGGAG
TTCCCCGCGA AGCGAGAGGC GATGTACCGG GTCGTCGCGG ACCTGATCGC CGACGGCGTC
CCGATCGACG GCGTCGGGCA CCAGCTGCAC GTCAACCTCA CCCGGCCGGT CGCCCAGGTC
GACGCGACGC TGGCGCGATT CGCCGAGCTC GGGGTTGCCC AGGCCGTGAC GGAGCTCGAC
GTGAGCATCT CCCGGAGCGC GGACGAGAGC CTCCCGACGA CCCCGCCCGA ACGACTCGTC
GAGCAGGGTT ACTACTACCG CGACCTGTTC GAGGTGCTGC GGGCGCACGA GCTCGCCTCC
GTCACCCTCT GGGGCCTGCA CGACGGCCGC AGCTGGCTGC GGACGTGGCC CATCGAGCGT
CCCCACGAGG CGCCGCTCGC GTTCGATGAC CGGCTGCAGG CCAAGCCGGC GTACTGGGGG
ATCGTCGACC CGGGCCAACT GCCGCACCTG CCACGCGCCG CGCGCGTCCC GGCGGCCGCC
GTCGAGCTCG GCCCGGACGC CCCCACCGAC CCCGAGTGGT CGCTCGTCCC GCTCACCGAG
GTCGGGGCGA GCGAGGCGGG CACGTCGACG TTCGGAGGCC GCTGGGACGC GAGCCGCCTC
ACGGTGCTCG TCCGGGTGGC CGACGCCACG CCCGAGGGGG ACGACGCCGT CGAGCTCTTC
GCCGACGGTC CCGTGCCCTA CCGCGTGGCG CGCGACGGGA CGACGACGGG GGAGGGGAGC
GGGGCCGTCG TGATCGAACG CCCCGACGGA ACGGGGTACG ACGTCGTCGC GGCCCTTCCG
TTGACCGCGG CGGAGCCGGG CGCGTCGGTG CCGTTCGACC TCCGGCTCAC CGACGCGTCC
GTCGGCCAGG TCTCGTGGAG CGATCTCAGC CACACGCAGG AGACGCGCCC CGAACGTCGC
GGTGCGCTCG AGCTGTCCGA GGAGGTGCCG GTCGTGGACG TGCCGCTCGC CCGGGTCGTC
CCGGTGGTCG ACGGCGTGGT CGAGGCGGCG TGGGACGGTG CGGTGGTCGT CGCGACAGGC
GTCCAGGTCG AGGGCACACC GGGCGCGAGT GCGGACGTCC GGCTTCTGTG GTCCGACGGA
GCCCTGCACG CGCTCGCCGA GGTGACGGAC CCGGAGATCG ACACGTCGAA CTCGAACGCG
TGGGAGCAGG ACTCGGTCGA GATCTTCCTG GACCCGGGCA ACACAAAGGC CGGCGCGTAC
GACCCCGACG ACGGCCAGTA CCGCGTCAGT GCCACAGGGC ACGTCTCGAT CAGCGGTGAC
CTCGAGGTCA TCGGCGACAA CCTCACGAGC GCCGCGACTC TCACCCCGAC GGGGTACGTC
GTCGAGGCGT CGCTGGTGCT CGACGGCGCC GCGACCAGCG TGCTCGCCGG CCTGGAGCTG
CAGGTCAACG ACGCCACCGA CGGCGCACGC TCGTCCGTGA GAACCTGGGC CGACCCGACC
GGGCTGTCGT ACCAGAACAC CTCGCGCTGG GGCGTCGCGC GCCTGGCGGG GCGGGCGGTG
CCAGCCTGCA CGAGCACGGT GACGGACGAC GTGCGCGGAC CGCTTGTGAT CTCCGACGGC
GTCACGTGCC TCGACGGTGC CGAGGTCCGC GGACCGGTCC TCGTGCGCAC CGGCGCGAGC
CTGGTCGCTC GAACTGCGGA GATCCGTGGC CCCCTGGCCG TGAGCAGGGC CGGCGTGGTG
CACCTCGAGG ACGTGCGGGT GTCCGGGCCG ATCGCCGTGT CCGGCGCCGA GGTCCTGCGC
CTGGACCGTG CTGACGTCCG CGGGCCCGTC GGCATCACCG GCGTGTCACA CCTCGCCATC
GTGTCCGGTT CTACGATCGC CGGCCCGCTC GCGTGCTGGG GGAACGCGGC GACGCCCACC
GACGACGGCG TGGCGAACGT CGTGCGCGGC CCGACCTTCG GGCAGTGCGC CGGGTTCTAG
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| Protein sequence | MQLARRIETI GTSLLALVLV TGTASLGNAV GAPPPEPAAP AQAVVTSDFE DGTTQGWSGR
GSASVAVTAD AAHDGAASLL VTGRTQAWNG ASLDVTSAFE AGTTYGVDLW LRLATGAEPT
DLRVSVQRDA GGSSIFDTVA TVSATADAWV QVAAEYTMPA AAEATQLYVE STGSLTDFLL
DGVVVTGEEV PPVQEDIPPL RDVLAGDFGI GVAIDARETT GASAQLLTRH FGQITAENAM
KPESIQPTEG EFTFEAADAL VAFAQQNDLR VYGHTLVWHS QTPEWFFARA DGTPLTSSPE
DQAILLGRME AHITAMGERF GDAAWAWDVV NEAIDESQPD GLRRSRWYEV LGPDYLTHAF
RFADAAFPDA QLFLNDYNTE FPAKREAMYR VVADLIADGV PIDGVGHQLH VNLTRPVAQV
DATLARFAEL GVAQAVTELD VSISRSADES LPTTPPERLV EQGYYYRDLF EVLRAHELAS
VTLWGLHDGR SWLRTWPIER PHEAPLAFDD RLQAKPAYWG IVDPGQLPHL PRAARVPAAA
VELGPDAPTD PEWSLVPLTE VGASEAGTST FGGRWDASRL TVLVRVADAT PEGDDAVELF
ADGPVPYRVA RDGTTTGEGS GAVVIERPDG TGYDVVAALP LTAAEPGASV PFDLRLTDAS
VGQVSWSDLS HTQETRPERR GALELSEEVP VVDVPLARVV PVVDGVVEAA WDGAVVVATG
VQVEGTPGAS ADVRLLWSDG ALHALAEVTD PEIDTSNSNA WEQDSVEIFL DPGNTKAGAY
DPDDGQYRVS ATGHVSISGD LEVIGDNLTS AATLTPTGYV VEASLVLDGA ATSVLAGLEL
QVNDATDGAR SSVRTWADPT GLSYQNTSRW GVARLAGRAV PACTSTVTDD VRGPLVISDG
VTCLDGAEVR GPVLVRTGAS LVARTAEIRG PLAVSRAGVV HLEDVRVSGP IAVSGAEVLR
LDRADVRGPV GITGVSHLAI VSGSTIAGPL ACWGNAATPT DDGVANVVRG PTFGQCAGF
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