| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1246 |
|---|
| Symbol | |
|---|
| ID | 7859557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 1411254 |
|---|
| End bp | 1414160 |
|---|
| Gene Length | 2907 bp |
|---|
| Protein Length | 968 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643865330 |
|---|
| Product | preprotein translocase, SecA subunit |
|---|
| Protein accession | YP_002881268 |
|---|
| Protein GI | 229819742 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
|---|
| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.772177 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCTTCGA TCCTCGACAA GGTCCTCCGC ATGGGGGAGG GCCGGATCCT CAAGAAGCTC
ACCGGCATCG TGGCTCAGGT GAACGCGCAC GAGGACACGG TCCGAGAGTT CACCGACGCG
GAGCTGCGCG AGGAGACGGA CGTCTTCAAG GCGCGCCTGG CCGACGGCGA GACGCTCGAG
GCGATCCTCC CGGAGGCGTT CGCCACGGTG CGCGAGGCGG CCCGCCGCAC GCTGGGGCAG
CGCCCGCACG ACGTGCAGGT CATGGGCGGC GCGGCGCTCC ACCTCGGAAA CATCGCGGAG
ATGAAGACCG GTGAGGGCAA GACGCTCGCC GCCACGCTCC CGGCCTACCT CAACGCGCTC
AGCGGCGACG GCGTCCACGT GGTCACGGTC AACGACTACC TGGCCCAGTA CCAGAGCGAC
CTCATGGGCC GCGTCTACCG CTTCCTCGGA CTGACGACCG GCTGCATCCT GTCGGGGCAG
AAGCCGGAGG AGCGGCGTCG GCACTACGCC GCGGACATCA CGTACGGCAC GAACAACGAG
CTGGGCTTCG ACTACCTGCG CGACAACATG GCGTGGTCGT CGGGCGAGCT CGTGCAGCGC
GGCCACAACT TCGTCATTGT CGACGAGGTG GACTCGATCC TCATCGACGA GGCCCGCACG
CCCCTCATCA TCTCCGGGCC CGCCTCCGGC GACGCGAACA AGTGGTACGC GGAGTTCGCC
CGCGTCGCGC GTCGGCTGAC GCGCGAGAGC GACTACGAGG TGGACGAGAA GAAGCGCAAC
GTCGGCGTGC TCGAGCCGGG CATCGAGAAG GTCGAGGACT ACCTCGGCAT CGACAACCTG
TACGAGTCGC TCAACACCCC GCTCATCGGG TTCCTCAACA ACGCCATCAA GGCGAAGGAG
CTGTTCAAGC GGGACAAGGA CTACGTCGTC CTCAAGGGCG AGGTGCTCAT CGTGGACGAG
CACACCGGGC GCATCCTGGC GGGCCGCCGC TACAACGAGG GGATGCACCA GGCGATCGAG
GCCAAGGAAG GCGTGGCGAT CAAGGCGGAG AACCAGACGC TCGCCACGAT CACGCTGCAG
AACTACTTCC GCCTCTACGG CAAGCTCGCC GGGATGACCG GTACCGCCAT GACGGAAGCG
GCCGAGTTCC AGGGGACCTA CAAGGTGGGC GTCGTCCCCA TCCCGACGAA CATGCCGATG
GCGCGCCTCG ACAAGCCGGA CCTCGTGTTC AAGAACGAGG ACGGCAAGTT CGACGCCGTC
GTCGAGGACA TCGTGGAGCG CCACGCGGCT GGGCAGCCCG TGCTCGTGGG CACGACGAGC
GTCGAGAAGT CGGAGCTGCT GAGCACGAAG CTCAAGCGCC AGGGCGTGCC GCACGAGGTG
CTGAACGCGA AGCAGCACGC GCGGGAGGCG TCGATCGTCG CGATGGCGGG TCGGAAGGGC
GCCGTCACCG TGGCGACGAA CATGGCCGGC CGTGGGACGG ACATCATGCT CGGCGGGAAC
GCGGAACACC TGGCCATCGC CACTCTCGCG GAGCAGGGTC TGGACCCGAA CGAGACGCCC
GAGGAGTACG AGGCCGCCTG GCCGGACGCT CTGGAGGAGG CGACGACGTC GGTCGCCGCG
GAGCACGACG AGGTCGTCGA TCTCGGCGGG CTGTACGTGC TGGGCACGGA GCGGCACGAG
TCGCGACGGA TCGACAACCA GCTGCGCGGC CGGTCCGGGC GTCAGGGCGA CCCGGGGGAG
TCGCGCTTCT ACCTGTCGAT GGGGGACGAC CTCATGCGGC TGTTCAACTC AGGACTCGCG
GAGCGGTTCA TGGGTTCCTC TGCCTACCCC GACGACATGC CTCTCGAGTC GAAGCTCGTG
ACCCGCGGCA TCGCGAGCGC GCAGGGCCAG GTCGAGGCGC GCAACTTCGA GATCCGGAAG
AACGTGCTCA AGTACGACGA CGTCCTGTCG CGGCAGCGCG CCGTCATCTA CACGGACCGA
CGCCGCGTGC TCGAGGGTGA GGACCTCGCC GAGCAGGTGC AGGGCTTCCT CACGGATGTC
GTCACCGCGT ACATCGAGTC CGCCACGCAG GCGGGCGCAC CGGAGTCGTG GGACCTGGAC
GAGCTCTGGA CGGCGCTCAA GGCCGTGTAC CCGATCTCGA TCACGCCCGA GGAGGTGGTG
TCCGAGGCCG GCAACGCCAC GCGCGTGACG CCGGAGATGC TCACGCGGGA GATCCTGTCG
GACGCCGAGC ATGCGTACGC GCGGCGCGAG GAAGAGCTCA CGCCGGACGT GATGCGCCAG
CTCGAGCGGC GCGTCGTCCT CGCGGTGCTG GACCGCAAGT GGCGCGAGCA CCTCTACGAG
ATGGACTACC TCAAGGAGGG CATCGGCCTC CGGGCGATGG CCCAGCGCGA TCCCCTGGTC
GAGTACCAGC GGGAGGGCTT CCAGCTCTTC TCCGCGATGC GCGACGCGAT CAAGGAGGAA
GCGGTCGGCT ACCTCTTCAA CCTCGAGGTG AAGCGTCCGG AGCCGGCAGA GAGCGCCGAG
GAGAGCACCG ACGGTGCGCC GGTGGTTCCC GCCGTCCCGA CGGGCTCCGA CGGCGAACCG
CTGGCACCCG AGCAGGAGGC GGTCCCGGCG GGCGAGCCGG AGCGGCCCGC GAAGCGCCGG
CCGGCGGCGC GCGTGGCGAC ACGACCCGCG GCCGAGGTGG ACCCGCTCGG GCTCGACACG
CCTGAGCGAC CGGCCGCGCT GCAGTACTCG GCGCCGTCGT CCGACGGGGG CAGCTCGTTC
AGCGAGGGTC GGGTGGTGCG CAGCGAGGGC GGCACGTCCG GCGGTTCCGC ACGTCCGGCG
GCGGGCGCCT CCTCCGGCGG GGGCGGCGGC GGCGCGAACC GCGAGGCCCG CCGTCGCGCG
GCGAAGGCGG CCAAGAAGCG CCGCTGA
|
|---|
| Protein sequence | MPSILDKVLR MGEGRILKKL TGIVAQVNAH EDTVREFTDA ELREETDVFK ARLADGETLE
AILPEAFATV REAARRTLGQ RPHDVQVMGG AALHLGNIAE MKTGEGKTLA ATLPAYLNAL
SGDGVHVVTV NDYLAQYQSD LMGRVYRFLG LTTGCILSGQ KPEERRRHYA ADITYGTNNE
LGFDYLRDNM AWSSGELVQR GHNFVIVDEV DSILIDEART PLIISGPASG DANKWYAEFA
RVARRLTRES DYEVDEKKRN VGVLEPGIEK VEDYLGIDNL YESLNTPLIG FLNNAIKAKE
LFKRDKDYVV LKGEVLIVDE HTGRILAGRR YNEGMHQAIE AKEGVAIKAE NQTLATITLQ
NYFRLYGKLA GMTGTAMTEA AEFQGTYKVG VVPIPTNMPM ARLDKPDLVF KNEDGKFDAV
VEDIVERHAA GQPVLVGTTS VEKSELLSTK LKRQGVPHEV LNAKQHAREA SIVAMAGRKG
AVTVATNMAG RGTDIMLGGN AEHLAIATLA EQGLDPNETP EEYEAAWPDA LEEATTSVAA
EHDEVVDLGG LYVLGTERHE SRRIDNQLRG RSGRQGDPGE SRFYLSMGDD LMRLFNSGLA
ERFMGSSAYP DDMPLESKLV TRGIASAQGQ VEARNFEIRK NVLKYDDVLS RQRAVIYTDR
RRVLEGEDLA EQVQGFLTDV VTAYIESATQ AGAPESWDLD ELWTALKAVY PISITPEEVV
SEAGNATRVT PEMLTREILS DAEHAYARRE EELTPDVMRQ LERRVVLAVL DRKWREHLYE
MDYLKEGIGL RAMAQRDPLV EYQREGFQLF SAMRDAIKEE AVGYLFNLEV KRPEPAESAE
ESTDGAPVVP AVPTGSDGEP LAPEQEAVPA GEPERPAKRR PAARVATRPA AEVDPLGLDT
PERPAALQYS APSSDGGSSF SEGRVVRSEG GTSGGSARPA AGASSGGGGG GANREARRRA
AKAAKKRR
|
|---|
| |