Gene Bcav_1245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1245 
Symbol 
ID7859556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1409820 
End bp1411028 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content73% 
IMG OID643865329 
Productprotein of unknown function DUF1006 
Protein accessionYP_002881267 
Protein GI229819741 
COG category[S] Function unknown 
COG ID[COG3214] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGACGC TCGCGCAGGC ACGCCGCAGC GCGATCGCAG CCCAGGGGTT GGCCCGTGCG 
CGGCCGGCGG GTTCGGTGAC CATGGGTCAC CTGCAGCGGC TCGTGGACCG TATCGGCCTG
CTCCAGATCG ACTCGGTCAA CGTGATCGCC CGGGCGCACC TCCTGCCGAT CTACTCGCGG
CTCGGCCCGT ACGACACGGC GCTGCTGCAG CGGGCCAGCA GCGTCTCGCC GCGCCGGCTG
GTCGAGTATT GGGCGCACGA GGCGTCGTTC GTCCCGCCGG AGACGTACCA GCTCCTGCGC
TGGCGGATGA CGGCGAACGC CGCGAGTCAC TGGGCCGTGT CGTTCTCGGC GTCCCACTCC
GACGTCCTCG ACGCGGTCCG TGATCTCGTC GCTGACTCCG GCCCGCTCAC GGCACGCGAG
GCGCACGATC GGCTCGACCA CTCGACCCCC GTCCAGCGCG AGGAGTGGGG GTGGAACTGG
ACGATCGCGA AGCGCGCGCT CGAGCACCTG TTCTTCGTCG GGGAGCTGAC GTCGGCCGGG
AGAACGACGC AGTTCGAGCG TCGCTACGAC CTGACGGAGC GCGTGCTGCC GCCGGCCGTC
CTGGCCGAGC CGGTCCCGGA CACGGCCACG GCGCAGCGCG AGCTCGTCCG GATCGCCGCC
TCGGCGCTGG GCGTCGCCTC CCTGCGGTGC CTGCGCGACT ACTTCCGCAT GCCCGCCGAG
GCAACGCAGC GGGCCGTGAC CGAGCTCGTC GACGCCGGTG AGCTCCATGC GGTGACCGTG
CGCGACTGGG GGCCGGCGTA CGTCCACGAG GCGGCGGCCC ACCCGCGCCG GGTCCGCGCC
CGCGCGCTGC TCGCGCCGTT CGACCCGCTC GTGTTCGAGC GCGCACGGCT CGAGGCGCTG
TTCGGCATGC ACTACCGCAT CGAGATCTAC ACGCCCGCCC ACAAGAGGGT GCACGGCTAC
TACGTCCTGC CGTTCCTGCT CGGCGACGCG ATGGCCGCGC GTGTCGACCT CAAGGCGGAC
CGCGCGTCGG GCCGTCTCCT GGTGCGCGCG GCGTTCGCCG AAGATGGCGC GCCCGCCGAC
ACCGCGGAGG AGCTCGCCGC CGAGCTCGGC GAGCTGGCCA CCTGGCTCGG TCTCTCGGAC
GTCGTGATCG ACGACGCCGC ACGTGGAGAC CTCCTGGCGG GTCTGGCGCC GCTGCTCCCT
CGCACCTGA
 
Protein sequence
MLTLAQARRS AIAAQGLARA RPAGSVTMGH LQRLVDRIGL LQIDSVNVIA RAHLLPIYSR 
LGPYDTALLQ RASSVSPRRL VEYWAHEASF VPPETYQLLR WRMTANAASH WAVSFSASHS
DVLDAVRDLV ADSGPLTARE AHDRLDHSTP VQREEWGWNW TIAKRALEHL FFVGELTSAG
RTTQFERRYD LTERVLPPAV LAEPVPDTAT AQRELVRIAA SALGVASLRC LRDYFRMPAE
ATQRAVTELV DAGELHAVTV RDWGPAYVHE AAAHPRRVRA RALLAPFDPL VFERARLEAL
FGMHYRIEIY TPAHKRVHGY YVLPFLLGDA MAARVDLKAD RASGRLLVRA AFAEDGAPAD
TAEELAAELG ELATWLGLSD VVIDDAARGD LLAGLAPLLP RT