| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1244 |
|---|
| Symbol | |
|---|
| ID | 7859555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 1409075 |
|---|
| End bp | 1409722 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643865328 |
|---|
| Product | sigma 54 modulation protein/ribosomal protein S30EA |
|---|
| Protein accession | YP_002881266 |
|---|
| Protein GI | 229819740 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
|---|
| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATCG TCGTCGTCGG CCGCCACACC GAGGTGCCGA CCCGTTTCCG CCGGCACGTC
GAGGACAAGC TGTCCAAGGT CGAGCAGCTC GCTCCCTTTG CCCAGCGCAT CGACGTCGAG
GTCACGCACG AGCCGAACCC GCGTCAGGCG GAGACGGCCG AGCGGATCGA GCTCACGGTG
CGTGACCGCG GGCCGGTCGT GCGGGCGGAG GCGAGCGCGA GCGACCGCTA CGCGGCGCTC
GACGCCGCGA CGACGAAGCT CCTGGAGCGG TTGCGTCGCG TGCGCGACCG CCGCAAGACG
CACCACAACC GCAAGGATCC GATGCCGAGT CTCGACCTGC GCCCGCCGGG CGCGGCCGCG
GGCGCCGACG ACCGGCCGGA GATCCAGGAC CACCCCGTCG CGCCGAGCGA GCGCGGGGTG
GCCGTCGAGG CGCAGCTCGG CGACTCGCCC GTGCTGATCC GGCAGAAGGT CCACGAGGCC
GCGCCGATGA GCGTCGACGA CGCGCTGTAC GAGATGGAGC TCGTCGGGCA CCCGTTCTAC
CTCTTCATCG ATGCCGAGAC GGCTCAGCCG TGCGTGGTGT ACCGGCGTCG CGGCTGGACC
TACGGCGTCA TCCGGCTCGA CGCCCCGGTG GCGGTGCCTG CGCACTGA
|
|---|
| Protein sequence | MEIVVVGRHT EVPTRFRRHV EDKLSKVEQL APFAQRIDVE VTHEPNPRQA ETAERIELTV
RDRGPVVRAE ASASDRYAAL DAATTKLLER LRRVRDRRKT HHNRKDPMPS LDLRPPGAAA
GADDRPEIQD HPVAPSERGV AVEAQLGDSP VLIRQKVHEA APMSVDDALY EMELVGHPFY
LFIDAETAQP CVVYRRRGWT YGVIRLDAPV AVPAH
|
|---|
| |