Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1236 |
Symbol | |
ID | 7859547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 1398659 |
End bp | 1399504 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643865320 |
Product | ABC-2 type transporter |
Protein accession | YP_002881258 |
Protein GI | 229819732 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCGC AGGCCACGGG GGCCGAGAAC CCGACCCTGA CCACCACGGC GCTGCGCGAG GCCGTGGCGC TCCCCGTCCG GCCCAGTCGC CCGTCGGCCT TCTCCATGAC GCTGACGTTC GCGTGGCGCG CGCTGCTGAA GATCAAGCAC GTGCCGGAGC AGCTCTTCGA CGTGCTCGTG TCGCCGATCA TCTTCACGCT GATGTTCACG TACCTGTTCG GCGGGGCGCT GGCCGGGTCG ACGACGGCGT ACATCCAGTT CCTGCTGCCG GGGATCCTCG TGCAGACGAT CGTCATCGTC ACCGTCTACA CGGGCTACAC GCTGAACACG GACATCACCA AGGGTGTCTT CGACCGGTTC CGGTCGCTGC CGATCTGGCG CCCGGCACCC ATCGTCGGCG CGCTGCTCGG CGACACCGTC CGCTATTCGA TCGCGTCGGT GGTGTGCATC GCGCTCGGCC TGGTCATCGG GTTCCGGCCC GCGGGCGGGG TGGTGGGCGT GGTGCTCGGC GTGCTCCTGC TGCTGGTGTT CGCATTCTCG CTGAGCTGGA TCTTCACGAT CCTCGGCCTG CTGCTGCGGA CGCCGAACGC CGTGATGGGC GTGTCGATGA TGGTGCTGAT GCCGCTGACG TTCGCGTCGA ACATCTTCGT GGACCCGGCC ACCATGCCGA CGGCCCTGCA GCGGTTCGTC GAGGTCAACC CGGTCACGCA CCTGGTGACG GCGGTACGCG GGCTGATGGC GGGGACGCCG GACACCGGGG AGATCGTGTG GGTGCTCGTC TCGGCGGTCG TCCTGACGGC CGTGCTCTCG CCCATCACGA TGCGGCTGTA CCGCACGCGC CACTGA
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Protein sequence | MTAQATGAEN PTLTTTALRE AVALPVRPSR PSAFSMTLTF AWRALLKIKH VPEQLFDVLV SPIIFTLMFT YLFGGALAGS TTAYIQFLLP GILVQTIVIV TVYTGYTLNT DITKGVFDRF RSLPIWRPAP IVGALLGDTV RYSIASVVCI ALGLVIGFRP AGGVVGVVLG VLLLLVFAFS LSWIFTILGL LLRTPNAVMG VSMMVLMPLT FASNIFVDPA TMPTALQRFV EVNPVTHLVT AVRGLMAGTP DTGEIVWVLV SAVVLTAVLS PITMRLYRTR H
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