| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1235 |
|---|
| Symbol | |
|---|
| ID | 7861377 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 1397556 |
|---|
| End bp | 1398662 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643865319 |
|---|
| Product | daunorubicin resistance ABC transporter ATPase subunit |
|---|
| Protein accession | YP_002881257 |
|---|
| Protein GI | 229819731 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAGC AACGCGAACA CGAGGCCCAG ACGGCGGGCA GGGCGGCGCG CGGCGGCGCG
TCGCGTGACG GCGCCCTCGC CGTCGAGGCC GACGGGCTCG TCAAGCACTT CACCACCGGC
AAGCGGGTCA CGAAGGCCGT CGACGGCGTC GACCTGAGGA TCGCCGAGGG GAGCGTCTTC
GGGCTGCTGG GTCCGAACGG GGCCGGCAAG ACCACCATCG TGCGGATGCT CGCGACCCTG
CTGCGGCCGG ACTCCGGCAG CGCGCGCGTG CTGGGTCACG ACGTCGTGCA CGACGCCGAC
GCCGTCCGGT CCGCCGTCGG CCTCACCGGG CAGTACGCGT CGGTGGACGA AGACCTGACC
GGGACCGAGA ACCTCATGAT GCTCGCGCGG CTCTACGGGT TCGCGGGCGA GGCGGCGCGG
GTGCGGATCG CCGCCCTGCT GGAGGCGTTC GGCCTGGCCG ACGCCGGAGC GCGCCAGGTC
AAGACGTACT CCGGCGGGAT GCGCCGCCGC ATCGACCTCG CGGCCAGCCT GGTGCTCGCG
CCGCGGGTGC TGTTCCTCGA CGAGCCGACC ACCGGCCTCG ACCCGCGCAG CCGCAACCAG
GTGTGGGACA TCGTGCGCGT GCTCGTCGCC GACGGCGCCA CGGTGCTCCT CACCACGCAG
TACCTCGAGG AGGCCGACCA GCTCGCCGAC CGGATCGCCG TCGTCGACCA CGGCCGGATC
ATCGCGGAGG GCACGTCGAG CGAGCTCAAG CGCTCGGTCG GGCAGGGTGC GGTGACCATG
CGCCTGGCCG ACGCCTCGCA GCGCGCGGCG GCCGCCGCCG TCGTCGAACG CCTGCTGGGC
ACGCAACCGA CGCTCCCGGC CGACCCGTAC GCGCTCACCG CGCGGGTGCC GGACGACGGC
GCACCCGCCG TGGCGCGCCT CCTCCCCGCC CTCGGCGAGG AGGGCATCGT CGTGCCGGAG
TTCTCGCTGG GGCAGCCGAG CCTCGACGAG GTGTTCCTCA CGATCACCGG CAAGCCGCTA
CCCGACGGCG GTGACGACGC CGCCGGGAAT GGCGGTCCGG GTGCAGCGGA CCACACCGCG
ACTGTGAGCG AGGAGGTGTC CCGATGA
|
|---|
| Protein sequence | MAEQREHEAQ TAGRAARGGA SRDGALAVEA DGLVKHFTTG KRVTKAVDGV DLRIAEGSVF
GLLGPNGAGK TTIVRMLATL LRPDSGSARV LGHDVVHDAD AVRSAVGLTG QYASVDEDLT
GTENLMMLAR LYGFAGEAAR VRIAALLEAF GLADAGARQV KTYSGGMRRR IDLAASLVLA
PRVLFLDEPT TGLDPRSRNQ VWDIVRVLVA DGATVLLTTQ YLEEADQLAD RIAVVDHGRI
IAEGTSSELK RSVGQGAVTM RLADASQRAA AAAVVERLLG TQPTLPADPY ALTARVPDDG
APAVARLLPA LGEEGIVVPE FSLGQPSLDE VFLTITGKPL PDGGDDAAGN GGPGAADHTA
TVSEEVSR
|
|---|
| |