Gene Bcav_1219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1219 
Symbol 
ID7858875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1380121 
End bp1382157 
Gene Length2037 bp 
Protein Length678 aa 
Translation table11 
GC content73% 
IMG OID643865303 
Productglycosyl transferase family protein 
Protein accessionYP_002881241 
Protein GI229819715 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACACAC TGCAGAACGT CGTGCTCCCG ATCGAGCGCG ATGCGGACCT CCTGGCGCTG 
TACGTCGACG CCCGGGAACC AGGTCCGCTC GTGGCCGTCG AGGAGGAGAT CGAGGCGGAG
GACCTCTTCG AGCGACTCGA GGAGACCGCC GACCGTGAGG CGTCCGCCGA GGAGAGCAGG
GCCCTCGACG GCATCGGCTC CCGGCACCGG ATCGACGTCG CCGGGGGAGA CACGCTCTCC
TTCGCCACCT ACTTCAACGC GTTCCCGGCC TCCTACTGGC GGCGCTGGAC GGCCGTGCGT
CACGTGCGGC TCGTGCTGGA GCTCGCGGGC GCCGGCACCG TGCACGTGCA CCGCTCGGAC
GCCACGGGGG AGAGCACGCT CGTCGCGAGC GAGCGCGTGG CGACGTCGGT CGACGACGGC
GTCGCGCGCG TCAGCGTCGA CCTCGATCTG CGCGGTTTCG GCAAGGGCGG CTGGTACTGG
TTCGACCTCG CCGCCGAGGC CGAGGGCCTC AGCCTGCACC GCGGCCGGTG GGAGACCGAC
GCCGCGCCCC TGCGCACCGG GAAGGTGTGC CTGGGCATCA CCACGGTGAA CAAGGCCGAC
TACTGCGTCG CGTCGCTGCG CCGGCTCGCC GACGACGCGG ACATGCTCGA CGACGTCGAC
GTCGTCTACG TCGTCGACCA GGGCACGAAG AAGCTGCGCG ACGAGCCGGG GTTCGACGAG
GTCGCCGCCC GGCTGGGGGA CCAGCTCGAG GTGATCGAGC AGGCCAACCT CGGCGGGTCC
GGGGGCTTCT CCCGCTCGAT GCTGGAGACG CTCAAGCGGC CCGAGGCCGA CTTCGTGCTG
CTCCTGGACG ACGACGTCGT GGTCGAGACC GAGTCCGTGC TGCGCGCCGT CCGGTTCGCG
CGCCACACGT CGCAGCCCGT GATCGTGGGC GGGCACATGT TCGACCTCAA CCACCGGTCG
GTGCTGCACG CGTACAGCGA GATCGTCGAC ATGGGGCCGT TCATGTGGGG CTCCCGCTCC
GCGCGCGAGG AGCGGCACGA CTTCGCGACC GCGTCGCTGC GCGAGACGGG GTGGCTGCAC
CGCCGTCAGG AGAGCGACTA CAACGGCTGG TGGATGTGCC TCATCCCCAC GGTGGTGCTG
GAGGACGTCG GTCTCGCGGC GCCGCTCTTC CTCAAGTGGG ACGACTCGGA GTTCGGGCTG
CGCGCGAAGC ACGCCGGCTA CCCGACCGTG TCGATGCCCG GCGTGGCCCT GTGGCACATC
TCCTGGCTCG ACAAGGACGA CGGCATCGAG TGGCAGGCGT ACTTCCACGA GCGCAACCGC
GTGATCTCGG CGCTCCTGCA GTCGGAGGCG CCCGGCGGCG GCTGGCTCCT TCAGGACAGC
CAGCGGCAGG ACGTCAAGCA CCTCGTGTCC ATGCAGTACT ACACGGTCGC GCTGCGGCAC
GCCGCCCTGC GTGACGTGCT GGCCGGCCCG GACGTGCTGC ACGACATGCT GCCCGGGCGC
ATCGCCGAGG TGCGGGCCAT GACGGCGTCG CACCCGGAGA CGGTGCGCCA CGACCCCGAG
GACATCCCGG CGCCGACGGC GTGGACACCG CGTTACCGTG CCCCCATGGA AGGCTGGCCG
CGCGGCTGGC GCCTCGGACC GTTCACCGCC GTCCAGGTGC TGCGGCACGG GCTGCTGCCG
GCACCGGCGT CCGCCGCCGA GCGGCCCCAG GTGGAGTTCG CACCCCGGTA CGGCACCTGG
TGGCGCGTGC CGCGCTACGA CAGCGCCCTC GTGCCGACGG CCGACCGGAC GGCGCGGTAC
TGGTACCGGC GCGACCGGGC GAAGTTCCGC CGTCAGCTCC TCGACAGCGT GCGCCTGCAC
CGGCGGGTGC GGCGGGACTG GGACGGCCTG AGCGAGACGT ACCGCTCGGC GCTGGCCCGG
ATCACCTCCC CCGAGGCGTG GGCGGCGACG TTCGGCGTCG ACGCTCCGGC GCCGCTCGTC
CGGGTGAGCG CCACCACGGA GGCGCCCCCC GCCGTCGGCC CGGAGGATCG CCAGTGA
 
Protein sequence
MNTLQNVVLP IERDADLLAL YVDAREPGPL VAVEEEIEAE DLFERLEETA DREASAEESR 
ALDGIGSRHR IDVAGGDTLS FATYFNAFPA SYWRRWTAVR HVRLVLELAG AGTVHVHRSD
ATGESTLVAS ERVATSVDDG VARVSVDLDL RGFGKGGWYW FDLAAEAEGL SLHRGRWETD
AAPLRTGKVC LGITTVNKAD YCVASLRRLA DDADMLDDVD VVYVVDQGTK KLRDEPGFDE
VAARLGDQLE VIEQANLGGS GGFSRSMLET LKRPEADFVL LLDDDVVVET ESVLRAVRFA
RHTSQPVIVG GHMFDLNHRS VLHAYSEIVD MGPFMWGSRS AREERHDFAT ASLRETGWLH
RRQESDYNGW WMCLIPTVVL EDVGLAAPLF LKWDDSEFGL RAKHAGYPTV SMPGVALWHI
SWLDKDDGIE WQAYFHERNR VISALLQSEA PGGGWLLQDS QRQDVKHLVS MQYYTVALRH
AALRDVLAGP DVLHDMLPGR IAEVRAMTAS HPETVRHDPE DIPAPTAWTP RYRAPMEGWP
RGWRLGPFTA VQVLRHGLLP APASAAERPQ VEFAPRYGTW WRVPRYDSAL VPTADRTARY
WYRRDRAKFR RQLLDSVRLH RRVRRDWDGL SETYRSALAR ITSPEAWAAT FGVDAPAPLV
RVSATTEAPP AVGPEDRQ