Gene Bcav_1207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1207 
Symbol 
ID7858863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1367528 
End bp1370893 
Gene Length3366 bp 
Protein Length1121 aa 
Translation table11 
GC content79% 
IMG OID643865291 
Productglycosyl transferase domain-containing protein 
Protein accessionYP_002881229 
Protein GI229819703 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.385069 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACA CTCCCGAGAA CACGCAGCCC GCTCAGCCCG GCGTCCTCGC AGTCGTCGTC 
GCCGCGGGCG TCACCAGCTA CCTCCTGGAC ACGCTGCGCG CCGTCGCCGC CCAGGAGCAC
GGTCCCGACC ACGTCGTCGT CGTCAGCACC GTGGAGCGCG AGGTCCGCGC CGTCCGCGAC
GTCGCCCGCG AGGCGGGCCT GCCGGACGCC GACGTCCGCG CCGCACCCCG CGCACGCACC
TTCGGCGGCG CCGTCCGCGC CGTCCTCGGC CAGCTTCCCG ACGCCGCTGC GGCCCAGCCG
TGGCTCTGGC TCCTCCACGA CGACTCCGCA CCCCACGACG ACGCGCTCGC GGCGCAGCTG
CGCGTGGTGC AGCAGGGGTC GTCGGTCGCC GTCGCCGGCG CGAAGCAGAC CGAGTGGCAC
CGCCCGGACC ACCTCGTCTC GGTCGGCGTC ACCACCACGC CCACCGGGCG CCGGTTCACC
GGCGTCGAGG ACGGTGAGAT CGACCAGGGG CAGCACGACG GGCGGGAGGA CGTGCTCGCC
GTCGGGACGG CCGGCATGCT CGTCCGCCGC GACGTCTGGA CCGCCCTCGG CGGGCCCGAC
CCCGAGCTCG GCCCGTTCGG CGACGGCGTC GACCTGTGCC GTCGGGCGCG GCTGGCCGGG
CACCGCGTCG TCGTCGTCCC CGGTGCGCGG GTGCGGCACG CCCGCGCGTC CTACCTCGGG
GTGCGGGAGC GCCGGAACGG GGCGCAGGCC GACACCGAGC GCCGCACCGC CCCGCGCACG
CCGGACGAGC GCCGGAGCTG GGAGGCGCGG CGGCGAGCGC TGCTGCACGG CCGGCTCACC
GGCGTCTCCG GGCCGATGGT GGTGCCGGCC TTCCTGTGGA TGCTGCTCGT CGCCCCGGTG
CGGATGCTCC TGCGCGTCGC GACGAAGGAG ATCGGGCTCG TGGGCGCCGA GCTGCGCGCG
CCCCTCGCCG TCCTCGCCCG GGTAGGGCCG GTCGCCCGGT CCCGGCGGAG GGCGGCAGTG
ACGGCCCGGG TGCCGCGCCG CGCCCTGCGG CCGCTCCTGG TCAGCAACAC CCAGCTCTGG
CGGGCCCGTC GCGACGAGCG CCTGCAACGG GCCGAGGCGC GGCGCGCGGC GCGTGCCCCG
AGCGAGCTCG AGATCGCCGA ACGCGCGGCG ATGGCCCGAC GACGCCGCGG GGGGCTCGCC
GTCGTCCTGG CCGTGGCTGT GGCCGTGGCG GCCGTCGCCC TCGGGTCGCT GACGTTCGCC
GGGGCGCTCG TCGGTGGTTC GCTGCTCCCG GTCGACGGCG ACGTCGCCAC GCTCTGGACC
CGGGCGACCT CGTGGTGGGT GACGAGCGCG GACGGGTACT CCGGGCCGCC GGACCCGTTC
ACCGTGGTGC TCGCGGCGCT GACGACGCTG CTCGGCGGAC CGCTCGGGAC ACCGCCGCAC
GTCGCCGTCA CCGTGCTGGT GGTCGGGTCG GTGCCGCTGG CGGCTCTGGG CGCCTGGTTC
GCGGCCGGTG CGGCGAGCCG GTCCGTCCCG TTGCGGAGCT GGGCGGCGCT CGTGTGGGCG
GTCGCGCCGC CGCTCCTGCT CGCCACGTCG TCCGGCCGGA TCGGCGCGCT GCTCGCGCAC
CTCGCGCTGC CCTGGGTCGC CCTCGGCGTC GCGCGGGCCC TCGGCGTCCA GCGCCGCGAC
GTCGTCCTCT CGGGGATGGT CGGGGCGAAG CGCGCCCACG CGGACGACGA CGAGGCGCCG
ACCCCGACCG CTGTCGTCCC CGTCGCGCGG CCCCGCGCAG GCTCGATCGG TGCTGCTGCG
GCCGCCGGGC TGGCGTTCGC CGTCGCGTGC GCGGGTGCGC CGGTGCTCCT GGGCGTCGGG
GTGCTCGCGC TCGTCGTCCT GGTGATCGCC GTCGGCCCGC GGCGCCGCGG GCGTCACGCG
GGCCGCACGC GCCTGCTCCT GGTGCTCGCC CCGGCGCTCG CCCTGCTCGG TCCGTGGCTC
ACCGGGGCGC TCGTCACCTC CGGGCCGCCC GACGCGTGGC GGCTGCTCGT GTCCGAGCCC
GGGCTGCCGC AGCCCGTGGA CGCGGGACCG GCCTGGTGGC AGCTGCTGGG CTGGCCGGTC
GAGCCCGCGG CCTGGCCGGG CGTCGCGGCC GGGGCGGGGG CGGTGGTCCC GCTGGTGGCC
TCGGGGACGC TCGTCCTCGC CGGCCTCGTC GCCCTGCTGC GCGGGTCCGG CAAGATCCGG
CCGGTCCGGA TCGGCTGGCT GGTCACGGGG ATCGGCCTCG TCGCCGCGCT CGTCGCCTCG
CGCACGGAGG TCGGCGTCGG GACGGCCGCC GACGGCAACG CGCAGGTCGC GTACGGCTGG
GCGGGCCCCG GCACGTCGGT GGTCGTGCTG GGCCTGCTCG TGGCCGCTGT CAGTGCCGGG
GACGGCCTGC GGGGCTGGCT GACGGAGCGC GCGTTCGGGT GGCGGCAGCT CACCGCGGGA
GTCGTCACGG TGGTCGTCGT GCTGGCCCCG CTGGCGACGG CCGCCGCCTG GGTATGGTCG
GTGCGCGCCG AGGAGTCACC GGGGAGCCCG GCGCTCGCGG TCGAGCCGCG CGGCGCCGAC
CCCGTGCCGG CCCTCGGCCG GCAGCTCCAG GAGAGCACCG CCGGCGCGCG TGTCCTCGCG
ATCTCGACCG ACGACGCCGG GTTGCGCGTG CAGCTCTGGC GGGACAACGG CCCGCAGCTC
CTCGACGCGA CGTCGCCGGT GACCGCGCGG GCGGTCTCGG GCGCGCCGCG CGAGGGTGTG
CCCGCGGCGC CCGACGCCGC CGACACGGCC CTGGCCGGGC TCGCGGCCCT GCTCGCCGCG
TCCTCGGACG CGGCGGCCGA CGAGCTCGCC GCGCACGCCG TCGGCGTCGT CGTCGTGCCG
CCGCTCGACT CCCGCGTCGC GCCCGGGCAC GACACGACGG CGCGGGCGCG GCTCGTGGCG
AGCCTCGACG CGACCGCCGG GCTCGAACGC GTCACGGAGA ACGCCTCGGG TGTCGTCTGG
CGGGTCGCTG CCGACGTCGG GAGCTCGCGC GCCCGGATCG TGACGCCCGG TGACGACGGA
GCTGCCGTCG TCGCCGCGGG CCTCGTCCGG GCCGGCGGGC ACCTCCCGGC GGCGAGCGTG
GAGCGCATCG TCGTGCTCGC GGAGCGAGCG GACGACGGGT GGCGCGCCAC GATCGGCTCC
GCCGAGCTGG AGGCGACCGC CGACGGCTGG GAGCAGGGGT TCACGGTGCC GGCCGGTCTC
GGCGGGGAGC TCCGCGTGAC CTACGACAGC CCGTGGCGGG TGCCGTGGGG CGTCGCCGTC
GTCACGGTTC TCGCGCTCTC GGCGTTGCTC GCCCTTCCCA CCCGCCGCCG ACGGGAGAGT
GACTAG
 
Protein sequence
MADTPENTQP AQPGVLAVVV AAGVTSYLLD TLRAVAAQEH GPDHVVVVST VEREVRAVRD 
VAREAGLPDA DVRAAPRART FGGAVRAVLG QLPDAAAAQP WLWLLHDDSA PHDDALAAQL
RVVQQGSSVA VAGAKQTEWH RPDHLVSVGV TTTPTGRRFT GVEDGEIDQG QHDGREDVLA
VGTAGMLVRR DVWTALGGPD PELGPFGDGV DLCRRARLAG HRVVVVPGAR VRHARASYLG
VRERRNGAQA DTERRTAPRT PDERRSWEAR RRALLHGRLT GVSGPMVVPA FLWMLLVAPV
RMLLRVATKE IGLVGAELRA PLAVLARVGP VARSRRRAAV TARVPRRALR PLLVSNTQLW
RARRDERLQR AEARRAARAP SELEIAERAA MARRRRGGLA VVLAVAVAVA AVALGSLTFA
GALVGGSLLP VDGDVATLWT RATSWWVTSA DGYSGPPDPF TVVLAALTTL LGGPLGTPPH
VAVTVLVVGS VPLAALGAWF AAGAASRSVP LRSWAALVWA VAPPLLLATS SGRIGALLAH
LALPWVALGV ARALGVQRRD VVLSGMVGAK RAHADDDEAP TPTAVVPVAR PRAGSIGAAA
AAGLAFAVAC AGAPVLLGVG VLALVVLVIA VGPRRRGRHA GRTRLLLVLA PALALLGPWL
TGALVTSGPP DAWRLLVSEP GLPQPVDAGP AWWQLLGWPV EPAAWPGVAA GAGAVVPLVA
SGTLVLAGLV ALLRGSGKIR PVRIGWLVTG IGLVAALVAS RTEVGVGTAA DGNAQVAYGW
AGPGTSVVVL GLLVAAVSAG DGLRGWLTER AFGWRQLTAG VVTVVVVLAP LATAAAWVWS
VRAEESPGSP ALAVEPRGAD PVPALGRQLQ ESTAGARVLA ISTDDAGLRV QLWRDNGPQL
LDATSPVTAR AVSGAPREGV PAAPDAADTA LAGLAALLAA SSDAAADELA AHAVGVVVVP
PLDSRVAPGH DTTARARLVA SLDATAGLER VTENASGVVW RVAADVGSSR ARIVTPGDDG
AAVVAAGLVR AGGHLPAASV ERIVVLAERA DDGWRATIGS AELEATADGW EQGFTVPAGL
GGELRVTYDS PWRVPWGVAV VTVLALSALL ALPTRRRRES D