Gene Bcav_1201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1201 
Symbol 
ID7858857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1362833 
End bp1363504 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content69% 
IMG OID643865285 
ProductMethyltransferase type 12 
Protein accessionYP_002881223 
Protein GI229819697 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.227994 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.867672 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATTCGA CGACGTCGTC GCCCACCACC GTCCCGCTGA CGTCGCCGAC CAGCCGTGCT 
GAGTACTGGG ACACGTACTA CGCCCGGTCG GGGAGCTCGG GACTTCCCGT CCCCTCCCAG
TTCGCGGTCT TCGTGGCGGG CGAGCTCGGC GGCCCGCACC GCGTCGTGGA CGTCGGCTGC
GGCAACGGAC GCGACTCGCT GTTCTTCCTG CTCCACGGGC ACCAGGTGGT CGGCATCGAC
GCGTCGCAGG TCGCGATCGA GCGGTGCCGG GACCGAGCCG ACCAGCTCGC CCTGGGCGGC
GACTTCGTCC GCGCGTCCAT CCTCGAGCCC CGGTTCGCGG AGCTGCTGCC GGACGGCGAC
CTGCCGACGG CCGTGTACGC GCGGTTCTTC CTCCACGCGA TCACGGACGA GGAGGAGGCG
GCGTTCCTGA GCTCGATCAG GGACTTCACC CGCCCGGGCG ACGTCGTCGC GCTCGAGTAC
CGCTCCGTCC GGGACGTCAG CCTCGAGAAG GTGACCGGGC AGCACTACCG GAGGTACGTG
GATCCCGCGC GGTTCAACGC CGACCTCGTG AAGCACGGAT TCACGATCAC GTACGCGGTC
GAGGGCTTCG GCTTCGCGAA GTACAAGAAC GACGACGCGT ACGTGGCGAG GGTGTGCCTG
ACCCGTGACT GA
 
Protein sequence
MDSTTSSPTT VPLTSPTSRA EYWDTYYARS GSSGLPVPSQ FAVFVAGELG GPHRVVDVGC 
GNGRDSLFFL LHGHQVVGID ASQVAIERCR DRADQLALGG DFVRASILEP RFAELLPDGD
LPTAVYARFF LHAITDEEEA AFLSSIRDFT RPGDVVALEY RSVRDVSLEK VTGQHYRRYV
DPARFNADLV KHGFTITYAV EGFGFAKYKN DDAYVARVCL TRD