Gene Bcav_1198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1198 
Symbol 
ID7858854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1357814 
End bp1358770 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content74% 
IMG OID643865282 
ProductUDP-glucose 4-epimerase 
Protein accessionYP_002881220 
Protein GI229819694 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID[TIGR01179] UDP-glucose-4-epimerase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.573437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.221308 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTGG TCGTCGTGGG CGGAGCGGGT TACATCGGCG CCCACGTCAC GCGGCTCCTC 
CTGGACCGAG GCGACGACGT CGTCGTCGTC GACAACCTCT CGACGGGCGA CGCCGCACGC
GTCGAGGGGG CGGAGCTCCA CCTCCTCACC GTCACGTCGG GCGACGACGC TGCCCTCGCC
GAGGTGCTCG GCGGGAGCGA CGCCGTCGTC CACTTCGCGG CACGCAAGAG CGTCGAGGAG
TCCGTGCACG ACCCCGTCGC GTACTACCGG GACAACGTCG TCGGCGTCAC GACCGTGCTG
GCGGCGATGC GCGACGCGGG GGTCGGCGGA CTCGTGTTCT CCTCCTCCGC GGCGGTCTAC
GGCGAGGCCT CCGGCGTCGT CAGCGAGTCG GCCGACCTGC GTCCGATCAA CCCGTACGGC
CGCAGCAAGG TGGTCGGCGA GTGGGCGGTG TCCGACGCCG CGGCGGCCTA CAGGATCCGT
GCCCTGAGCC TGCGGTACTT CAACGTGGCC GGTGCCGCCG ACCCGAGCCT GCGGGACCAT
GGCGCGCGCA ACCTCGTCCC CATCGCCGTC GAGCACGCAC GGCAGGGCCG GCCCGTCTCG
GTGTTCGGCG ACGGGTACGA CACCCCGGAC GGCAGCTGCG TGCGGGACTA CGTGCACGTC
AGCGACGTCG CCGACGCCCA CCTCGCCGCG CTGGACCACG TGGTCGCCGC CCCGGCCGGC
TACGACGACG TGCTCAACGT CGGCACCGGC GTCGGGTCGA GCGTGCTGGA GGTGCTGACG
ACCCTGGGCG AGGTGTCCGG TCAGGCCGTC GACTACGAGA TCGGGCCCCC GCGCGACGGC
GACCCCGCTG CCGTGATCGG CGCCGTCGGG AAGATCGAGG CCGTGCTGGG CTGGCGCGCC
TCCCGGGACC TGCGGGCGAT CGTCGGCAGC GCGTGGACCG CCGGGGTCAC CGCATGA
 
Protein sequence
MRVVVVGGAG YIGAHVTRLL LDRGDDVVVV DNLSTGDAAR VEGAELHLLT VTSGDDAALA 
EVLGGSDAVV HFAARKSVEE SVHDPVAYYR DNVVGVTTVL AAMRDAGVGG LVFSSSAAVY
GEASGVVSES ADLRPINPYG RSKVVGEWAV SDAAAAYRIR ALSLRYFNVA GAADPSLRDH
GARNLVPIAV EHARQGRPVS VFGDGYDTPD GSCVRDYVHV SDVADAHLAA LDHVVAAPAG
YDDVLNVGTG VGSSVLEVLT TLGEVSGQAV DYEIGPPRDG DPAAVIGAVG KIEAVLGWRA
SRDLRAIVGS AWTAGVTA