Gene Bcav_1197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1197 
Symbol 
ID7858853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1356728 
End bp1357804 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content73% 
IMG OID643865281 
Productglycosyl transferase family 2 
Protein accessionYP_002881219 
Protein GI229819693 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0797043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.230319 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGTCCG ACGGGCTGCT GTCGGTGGTG ATGACCGCCC GCGACGTCGA GGAGTACGTG 
GGCGAGGCCG TCTCCTCCGT CCTGGACCAG TCGTACCGGG ACCTCGAGCT CGTGGTCGTG
GACGACGGTT CGGCCGACGG CACCGCCGGC GTCCTCGCGG AGCTCGCGTC GCACGACCCC
CGGGTCCGGT TGCTCAGGGC GGACGGCGTG GGCCCTGGTG CGGCGCGGAA CCTCGCCCTG
CGGGAGGTGG GCGGCGAGCT GCTGACGTTC GTCGACGGCG ACGACGTGGT GCCGCAGGGC
GCGTTCGCCG CGCTCGTGGG GGCGCTCGGG TCGCAGGACG CCGACATCGC CGTCGGCGAC
GTCGTCCGGC TCCACGACCA CGGCCTCGGC CCGTCGCCTG CGCACGAGCG CTCGGTGCGC
CGCCGTCACG AGCGCACCCA CATCGACGCG GTGCCGGACC TCGTCTACGA CTCGACGGCG
TGGAACAAGG TCTACCGGCG GCGGCTCTGG ACCGACCACC GGCTCCACTT CACCGAGGGT
GCGATGTACG AGGACATCGC CGTCGTCCTG GAGGCCCACG TCCGCGCGTC GGCGGTGACG
ATCCTCGGCG AGGTCACCTA CCACTGGCGG TGGCGGCGCG ACTCGTCGTC GATCACGCAG
CTCAAGGGTC AGGAGCAGAA CCTCCGCGAC CGGGTCCGTG CGCTCGACCA CAGCCTGCAC
CTCACCGAGA ACCATCCGGA GCTCCGCGCG GCGTTGCTCG CGAAGATCCG ACGCTTCGAC
CTGCTCCTGT ACGCCTACCA CGCCGAGGTG GCGCGGGATC GCAGCTACCG GAAGCTGTAC
CGCGCCGCGG TCCGCCAGTT CGTCCCGGTG CGCGACGCCG TGCTGGCGCC CGATCTCGCC
GTCGAGGACC GGTTGGCCTA CCTCGCCGTG CACGCGGGCG CGTTCTCCGT CATCCAGCCG
ATGCGGCGCC TCGTGCGCAG CTCCCGGGAC GGCATCTCGT CCACGCGGGG GACCGTTCGG
CGCGCGGTGG GACATGGGCG CGCCAACCTG CGACGCGCGC GGCGCCGCCC TGGCTAG
 
Protein sequence
MPSDGLLSVV MTARDVEEYV GEAVSSVLDQ SYRDLELVVV DDGSADGTAG VLAELASHDP 
RVRLLRADGV GPGAARNLAL REVGGELLTF VDGDDVVPQG AFAALVGALG SQDADIAVGD
VVRLHDHGLG PSPAHERSVR RRHERTHIDA VPDLVYDSTA WNKVYRRRLW TDHRLHFTEG
AMYEDIAVVL EAHVRASAVT ILGEVTYHWR WRRDSSSITQ LKGQEQNLRD RVRALDHSLH
LTENHPELRA ALLAKIRRFD LLLYAYHAEV ARDRSYRKLY RAAVRQFVPV RDAVLAPDLA
VEDRLAYLAV HAGAFSVIQP MRRLVRSSRD GISSTRGTVR RAVGHGRANL RRARRRPG