Gene Bcav_1196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1196 
Symbol 
ID7858852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1355341 
End bp1356498 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content73% 
IMG OID643865280 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_002881218 
Protein GI229819692 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0216173 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.22946 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACGG CCGAGGCCTC CCTCCACCTG GTCCCGATCT ACGGCACGAG ACCAGAGGCG 
ATCAAGGTCG CGCCGATCGT CGCGGCCGCC GCGCGTCATC CGGCGATCGT GTGCTCGCCG
GTGGTGACGG GCCAGCACCG CGAGATCGTC GACCAGGTCA ACGAGCTCTT CGGCATGCGG
CCCGTGACGG ACCTCGACGT GTTCACCCAC GGAGTCGGGC TCGAGACGAC CACCGCGCGG
GTCCTCGAAC GGGTGACGCC CGTGCTGCGT CGCCTCGCGC CCGACGTCGT CCTCGTGCAG
GGCGACACGA CCTCGGCGTT CGCGGCGGCG CTCGCCGCCT TCTACCTCTC GATCCCGGTC
GTGCATCTCG AGGCGGGGCT GCGGACCTCG TCCTTGGCGT CGCCGTTCCC CGAGGAGGGC
AACCGGCGGC TGCTCACCCA GATCGCCTCC CTGCACCTCG CGCCGACCGC CGGCAACCGC
GCGAACCTGC TGCGCTCCGG GATCCCGGAG GACGACATCG TGGTAACCGG CAACACCGTG
ATCGACGCCC TCGTCGGCAC CGTCGCCGCG CGAGTGCCGC TGGCCGACCC GCACCTCGCC
CCGATCGAGG ACCTGACGGG GCCGCTCATC CTCGTGACGG CGCACCGGCG CGAGTCCTGG
GGTGAGCCCA TGCGGCGGTC CGCCCGCGCC GTCGCGACCG TGGCGCGGCG TCGCCCGGAT
GCGCTCGTCG TCCTCCCGAT GCACCCCAAC CCGACCGTGC GCGCGGTCCT CGAGCCCGAG
CTCGCCGGCA TCCCGAACGT CGTCCTCACC GAGCCGCTCG GGTACAGCGA CCTCGCGAAC
GTCCTCGCGA GGTCGACGCT CGTCGTCACG GACTCGGGCG GTCTCCAGGA GGAGGCGCCG
GCGCTGGGCA AGCCCGTGCT CGTGCTGCGG GAGAACACGG AGCGGCCGGA GGCCGTCGCG
GCCGGGACGG CCCGGCTCGT CGGCACCGAC GAGGCGGGGA TCGTCGCCGC GATCGAGGAG
CTGCTCGACG ATGCGGAGGT CTACGGCGCC ATGGCGAACG CCTTCAACCC CTACGGAGAC
GGCCATGCCG CGGAACGGGC GATCGCCGCC ATCGTCGAGC GCTTCGGCCA CACCGACGCC
GCGGCGAGCG CGTCATGA
 
Protein sequence
MSTAEASLHL VPIYGTRPEA IKVAPIVAAA ARHPAIVCSP VVTGQHREIV DQVNELFGMR 
PVTDLDVFTH GVGLETTTAR VLERVTPVLR RLAPDVVLVQ GDTTSAFAAA LAAFYLSIPV
VHLEAGLRTS SLASPFPEEG NRRLLTQIAS LHLAPTAGNR ANLLRSGIPE DDIVVTGNTV
IDALVGTVAA RVPLADPHLA PIEDLTGPLI LVTAHRRESW GEPMRRSARA VATVARRRPD
ALVVLPMHPN PTVRAVLEPE LAGIPNVVLT EPLGYSDLAN VLARSTLVVT DSGGLQEEAP
ALGKPVLVLR ENTERPEAVA AGTARLVGTD EAGIVAAIEE LLDDAEVYGA MANAFNPYGD
GHAAERAIAA IVERFGHTDA AASAS