Gene Bcav_1148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1148 
Symbol 
ID7860607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1290165 
End bp1290761 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content77% 
IMG OID643865232 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002881170 
Protein GI229819644 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.562135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.441003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGCCCG TGGAGGGCAC CGGCAGGCGG GAACGCAAGA AGCAGCAGAC GCGGGACGCC 
GTCGTCGCCG CCGCCACCGA CCTCTTCGCC ACCCGCGGCT TCCGGCAGAC AACGGTCGCG
GACATCGCGG CCGCCGCCGA CATCGCTCCC CGCACCTTCT TCCTCCACTT CGCGTCGAAG
GAGGACGTGC TGTTCGCTCA CGTCGAGGAC TTCGTGGCCG AGGCGGCGAA CGCGATCCGG
GCGGCGCCCC AGGGGGCGGA CCCGGTCGAC GCCGTGGTGG GCGCCGTCGA GCTGCTCGTC
GCCCACTTTC CCGAGATCGC GGCGCTCGCC GTCGACCGCT CACGGGTGCT GGGCGCCGTC
GCCGGTGTGC CGGTCTCGTT GCTGCGTCGA CTCGTGCGCG CCCACGCCGC GCTCGTCGCG
GCGGCCGAGG ACCGCTTCGG CGACGCCGTC GACGCGGTCG AGCTCGGGGC GCTCGTCGGG
GCGGTGCTGG GCGCGGCCTC GTCCGCCGCC CGCGCACGCC CCGGTGCCGA TGCCGGGGCG
GCGCAGGCGG CGATGCGCAC GGCGGTGCGG CGCGCCGCGC AGGGCTTCCG CGATTGA
 
Protein sequence
MRPVEGTGRR ERKKQQTRDA VVAAATDLFA TRGFRQTTVA DIAAAADIAP RTFFLHFASK 
EDVLFAHVED FVAEAANAIR AAPQGADPVD AVVGAVELLV AHFPEIAALA VDRSRVLGAV
AGVPVSLLRR LVRAHAALVA AAEDRFGDAV DAVELGALVG AVLGAASSAA RARPGADAGA
AQAAMRTAVR RAAQGFRD