Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1148 |
Symbol | |
ID | 7860607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 1290165 |
End bp | 1290761 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 643865232 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002881170 |
Protein GI | 229819644 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.562135 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.441003 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGGCCCG TGGAGGGCAC CGGCAGGCGG GAACGCAAGA AGCAGCAGAC GCGGGACGCC GTCGTCGCCG CCGCCACCGA CCTCTTCGCC ACCCGCGGCT TCCGGCAGAC AACGGTCGCG GACATCGCGG CCGCCGCCGA CATCGCTCCC CGCACCTTCT TCCTCCACTT CGCGTCGAAG GAGGACGTGC TGTTCGCTCA CGTCGAGGAC TTCGTGGCCG AGGCGGCGAA CGCGATCCGG GCGGCGCCCC AGGGGGCGGA CCCGGTCGAC GCCGTGGTGG GCGCCGTCGA GCTGCTCGTC GCCCACTTTC CCGAGATCGC GGCGCTCGCC GTCGACCGCT CACGGGTGCT GGGCGCCGTC GCCGGTGTGC CGGTCTCGTT GCTGCGTCGA CTCGTGCGCG CCCACGCCGC GCTCGTCGCG GCGGCCGAGG ACCGCTTCGG CGACGCCGTC GACGCGGTCG AGCTCGGGGC GCTCGTCGGG GCGGTGCTGG GCGCGGCCTC GTCCGCCGCC CGCGCACGCC CCGGTGCCGA TGCCGGGGCG GCGCAGGCGG CGATGCGCAC GGCGGTGCGG CGCGCCGCGC AGGGCTTCCG CGATTGA
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Protein sequence | MRPVEGTGRR ERKKQQTRDA VVAAATDLFA TRGFRQTTVA DIAAAADIAP RTFFLHFASK EDVLFAHVED FVAEAANAIR AAPQGADPVD AVVGAVELLV AHFPEIAALA VDRSRVLGAV AGVPVSLLRR LVRAHAALVA AAEDRFGDAV DAVELGALVG AVLGAASSAA RARPGADAGA AQAAMRTAVR RAAQGFRD
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