Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1122 |
Symbol | |
ID | 7859976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 1262217 |
End bp | 1264118 |
Gene Length | 1902 bp |
Protein Length | 633 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643865206 |
Product | GTP-binding protein TypA |
Protein accession | YP_002881144 |
Protein GI | 229819618 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGTGC GCTCTGACCT GCGCAATGTC GCGATCGTCG CACACGTCGA TCACGGCAAG ACCACGCTCG TCGACTCGAT GCTGTGGCAG ACGGGCGCGT TCGGCGCTCA CGACCACGTC GGCGAACGCG CGATGGACTC TGGCGACCTC GAGCGCGAGA AGGGCATCAC GATCCTCGCG AAGAACACCG CCATCGCCTA CTCAGGGCCG AGCGCCGCCG CTGCCGGGCA CCCCGAGGGC GTCACCATCA ACGTCATCGA CACGCCTGGT CACGCGGACT TCGGCGGCGA GGTGGAACGC GGGCTCTCGA TGGTCGACGG CGTGGTGCTC CTCGTCGACG CGTCGGAAGG CCCGCTGCCG CAGACCCGCT TCGTGCTCCG CAAGGCGATC GCCGCCCGCC TGCCCGTGAT CCTCGTGGTC AACAAGGTGG ACCGACCGGA CAGCCGGATC GAGGAGGTCG TCGGTGAGAC CACCGACCTG CTCCTGGCGC TCGCCAGCGA CCTCGAGGAC GAGGACATCG ACCTCGACGC CGTCCTCGAC GTCCCGGTCG TGTACGCCGC GGCGAAGGTC GGGAGGGCGT CCACGACGCC GCCCGCCGAC GGCGGCATGC CTGACGGGAC GGACCTCGAG CCGCTCTTCG CGACGATCCT CGAGCGGATC CCGGCGCCGT CGTACGACGA CGGCGCTCCC CTCCAGGCGC ACGTGACGAA CCTCGATGCG TCGCCGTTCC TGGGCCGCCT CGCGCTGCTG CGGGTGTTCA ACGGCACGCT GCGCAAGGGT CAGACGGTCT CCTGGGCGCG TCGCGACGGC TCGCTCACCC AGGTGCGGGT GAGCGAGCTC CTCGCCACCA AGGCGCTCGA CCGCGTGCCC GCCGAGAGCG CCGGCCCGGG GGACATCGTC GCCGTCGCCG GCATCGAGGA CATCACCATC GGCGAGTCGC TCGTCGACCC GGACGACCCT CGTCCGCTGC CGCTCATCAC CGTCGACGAC CCGGCGATCT CCATGACGAT CGGGATCAAC ACGTCCCCGC TGGCCGGCCG CGTGAAGGGG GCCAAGGTGA CCGCGCGGCA GGTCAAGGAC CGCCTCGACC GCGAGCTCGT CGGCAACGTC TCGCTGCGGG TGCTCCCCAC CGGTCGCCCG GACTCGTGGG AGGTCCAGGG CCGCGGCGAG CTCGCGCTCG CGATCCTCGT CGAGCAGATG CGCCGCGAGG GCTTCGAGCT CACGGTCGGC AAGCCCCAGG TCGTGACACG CGAGATCGAC GGCCGCACCC ACGAGCCGGT CGAGCGGATG ACGATCGACG TCCCCGAGGA GTACCTCGGT TCCGTCACCC AGCTGCTCGC CCAGCGCAAG GGCCGCATGG AGACGATGAC GAACCACGGC ACCGGCTGGG TGCGGATGGA GTTCCTCGTG CCGGCCCGTG GGCTCATCGG GTTCCGGACG CAGTTCCTCA CCGACACGCG CGGCACGGGC ATCGCGTCGT CGATCGCGGA GGGGTACGAG CCGTGGGCCG GGCCGATCGA GTTCCGCACG GCCGGGTCGC TCGTGGCCGA CCGCGCGGGC GCCGTGACGG CTTTCGCTCT CATCAACCTG GGTGACCGCG GGACGTTCTT CGTCTCGCCG GGCCAGGAGG TCTACGAGGG CATGGTCGTC GGCGAGAACA ACCGCGCCGA CGACATGGAC GTCAACATCA CGCGCGAGAA GAAGCTGAAC AACATCCGGT CCTCGACCGG GGACGAGCTC GAGCGGCTCA CGCCTCCGCG CCGGCTCACC CTGGAGGAGT CCCTGGAGTT CGCCCGCGAC GACGAGTGCG TCGAGGTCAC GCCGGAGGCG ATCCGCATCC GCAAGGTCGT GCTCGACCAG ACGGAACGCG GCCGGGCTGC GTCGCGGGCG AAGCGCGCCT GA
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Protein sequence | MPVRSDLRNV AIVAHVDHGK TTLVDSMLWQ TGAFGAHDHV GERAMDSGDL EREKGITILA KNTAIAYSGP SAAAAGHPEG VTINVIDTPG HADFGGEVER GLSMVDGVVL LVDASEGPLP QTRFVLRKAI AARLPVILVV NKVDRPDSRI EEVVGETTDL LLALASDLED EDIDLDAVLD VPVVYAAAKV GRASTTPPAD GGMPDGTDLE PLFATILERI PAPSYDDGAP LQAHVTNLDA SPFLGRLALL RVFNGTLRKG QTVSWARRDG SLTQVRVSEL LATKALDRVP AESAGPGDIV AVAGIEDITI GESLVDPDDP RPLPLITVDD PAISMTIGIN TSPLAGRVKG AKVTARQVKD RLDRELVGNV SLRVLPTGRP DSWEVQGRGE LALAILVEQM RREGFELTVG KPQVVTREID GRTHEPVERM TIDVPEEYLG SVTQLLAQRK GRMETMTNHG TGWVRMEFLV PARGLIGFRT QFLTDTRGTG IASSIAEGYE PWAGPIEFRT AGSLVADRAG AVTAFALINL GDRGTFFVSP GQEVYEGMVV GENNRADDMD VNITREKKLN NIRSSTGDEL ERLTPPRRLT LEESLEFARD DECVEVTPEA IRIRKVVLDQ TERGRAASRA KRA
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