Gene Bcav_1120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1120 
Symbol 
ID7859974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1258329 
End bp1260140 
Gene Length1812 bp 
Protein Length603 aa 
Translation table11 
GC content71% 
IMG OID643865204 
ProductABC transporter related 
Protein accessionYP_002881142 
Protein GI229819616 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA CCGTGGAGAC GACCGCTGCG GCGACGACAG GCGAGCCGAT CCTGTCGGTC 
CGGGGTCTCG ACGTCGACTT CTTCGTCGAC GGGGAGTGGC TCCCGGCGGC CATCGACGTG
ACGTACGACC TGCACCCCGG CGAGGTCCTC GCCATCGTCG GCGAGTCCGG CTCGGGCAAG
ACGCAGTCGT CGATGTCCCT GCTCGGGCTC CTCCCGCCGA ACGGTCGCGC CCGGGGCAGC
GCCACGCTCG GCGGTCGCGA GCTGATCGGG ATGAGCACGC GCAACCTGCG CCGGGTGCGG
GGCAAGGACA TCTCCGTCAT CTTCCAGGAG CCGATGACGG CGCTGAACCC CGTCTACACG
GTGGGCTTCC AGATCGTCGA GGCCCTGCGC GTCCACCAGA ACCTCGGCCC CGCGCGCGCC
AAGGAGCGAG CGCTGGAGCT GCTGCGCCTG GTCGAGATCC CGGAGCCCGA GCGTCGCTTC
GACTCGTACC CGCACCAGCT CTCCGGCGGG CAGCGGCAGC GCGCGATGAT CGCGCAGTCG
CTCGCCAACG ACCCGACGCT GCTCGTCGCT GACGAGCCGA CGACGGCGCT CGACGTCACC
GTGCAGGCCG AGATCCTCAA GCTGATGCGC GACCTGCGCG GGCGGATCAA CTCCGGCATC
ATCCTCATCA CCCACGACAT GGGCGTCGTC GCCGACATGG CGGACCGCAT CGTCGTCATG
AAGAACGGCC GCATCGTCGA GACGGGAACG GCTGCCGCGA TCTTCGGCGC GCCGCAGCAC
CCGTACACGA AGCAGCTGCT CGACGCCGTG CCGCACCTCG GCACCCACTC GACGGAGCCG
GCGCGGCGCG AGGAGCGTCG GGCAGAGCTC GAGGCGTTCA GCGCCGCCGA GCCCGTCATG
GCGGCGACCG GGCTCGAGAT CACGTACCCG AAGCGTGGGC GGAGCCCTGC GTTCCGGGCG
GTCGACGGCG TCGACCTCAC GATCGCACCC GGCGAGGTCG TCGGGCTCGT CGGCGAGTCG
GGTTCGGGCA AGACCACGAT CGGCCGGGCG GTCGTCGGCC TCCTGCCCGT CAGCGGGGGC
TCGCTGCGCA TCGGCGGCGT CGACATGGTG GGGGCGACGG CGAAAGACCT GCGCCCGCTG
CGGAGCCAGG TCGGCATCGT CTTTCAGGAC CCGGGCAGCT CGCTCAACCC GCGGCTGCCG
ATCGGGGAGT CCATCGGGGA ACCGCTCATG CTGCACCGTG GCGTCAAGGG CGCGGAGCTG
GCGCGGCACG TCGAGCGGCT CCTCGACCAG GTGGAGCTCC CGCGCTCGAT GCGCAACCGC
TACCCGCACG AGCTGTCCGG CGGGCAGCGG CAGCGCGTCG GCATCGCGCG TGCGCTGAGC
CTCGAGCCGA AGCTGCTCGT CGCCGACGAG CCCACCTCGG CCCTGGACGT GTCGGTCCAG
GCCCGCGTGC TCGAGCTGTT CCAGGACCTG CAGCGGGAGC ACGGGTTCGC GTGCCTGTTC
ATCAGCCACG ACCTCGCGGT GGTGGAGATG CTGGCGAGCC GGATCGCCGT CATGCACCAC
GGAAAGCTCG TCGAGATCGG CGCGACCGAA CAGGTCGTGT CCAACCCGCA GGACCCGTAC
ACGCAGCGCC TCATCGCCGC CGTCCCCGTT CCCGACCCGG ACGAGCAGCG CAAGCGCCGC
GAGATGCGGG ACGCGCTGCT CGAGGCCGCG GCCGGCGACG AGGACGAGCA CGCCTTGCAG
TTCGAGCAGG AGCTGGTGCT CGAGCAGGTC GACGACCCGG GTGCGTCAGC CAAGACCGGT
CCCGGACTCT GA
 
Protein sequence
MTETVETTAA ATTGEPILSV RGLDVDFFVD GEWLPAAIDV TYDLHPGEVL AIVGESGSGK 
TQSSMSLLGL LPPNGRARGS ATLGGRELIG MSTRNLRRVR GKDISVIFQE PMTALNPVYT
VGFQIVEALR VHQNLGPARA KERALELLRL VEIPEPERRF DSYPHQLSGG QRQRAMIAQS
LANDPTLLVA DEPTTALDVT VQAEILKLMR DLRGRINSGI ILITHDMGVV ADMADRIVVM
KNGRIVETGT AAAIFGAPQH PYTKQLLDAV PHLGTHSTEP ARREERRAEL EAFSAAEPVM
AATGLEITYP KRGRSPAFRA VDGVDLTIAP GEVVGLVGES GSGKTTIGRA VVGLLPVSGG
SLRIGGVDMV GATAKDLRPL RSQVGIVFQD PGSSLNPRLP IGESIGEPLM LHRGVKGAEL
ARHVERLLDQ VELPRSMRNR YPHELSGGQR QRVGIARALS LEPKLLVADE PTSALDVSVQ
ARVLELFQDL QREHGFACLF ISHDLAVVEM LASRIAVMHH GKLVEIGATE QVVSNPQDPY
TQRLIAAVPV PDPDEQRKRR EMRDALLEAA AGDEDEHALQ FEQELVLEQV DDPGASAKTG
PGL