| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1116 |
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| Symbol | |
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| ID | 7859970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 1252926 |
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| End bp | 1254833 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643865200 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_002881138 |
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| Protein GI | 229819612 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.709816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGATCA GGCGATTTGC CGCCTTCGGT GCAGCAGTGG CTGCCACCGC GCTCGCACTG
TCCGCTTGCC AGTCGCCCGG CAGTGGCAGC GACGACAACG GCGGCGACGA TGAGGGCCTT
TCCCAAGACA CAGCGGTCAC GTTCGGATGG AACCAGTCGT TCTACGAGTA CAACGGCGAC
TCGTCGACGG GCAACGCGAC CGCCAACGCG ATCGTGCTCT ACCTGATGAA CAGCGCCTTC
CGGTACTTCG ACGAGGACCT GAACATCGCT CAGGACACCT CGTTCGGCAC GTACGAGAAG
ACGAGCGACG ACCCGCTGAC CGTCGAGTAC ACGGTGAACG ACGACGTGGC CTGGTCCGAC
GGGACGCCCG TCGACGCTGC GGACATGCTC CTCTCGTGGG CAGCGACCAG CGGTCACTTC
AACACCCTCG CGGACGAAGA GGTCGAGACG GACGAAGAGG GCAACGTCAC CAACCAGGGT
GACAACGTCT ACTTCAGCGG CACCTCGGTC GCCTCGAGCT ACATCATCCC GACGCCGGAG
ATCAGCGAGG ATGGCAAGAC GATCACCCTC GTCTACGACC GCCCCTTCGC CGACTGGGAG
CAGGGCTTCG GCATCGGCGT CCCCGCCCAC GTCGTCGCGA TGCACGCGCT GGGGATCGAC
GACGCGACGG AGGCCAAGGA GGCCCTCATC GACGCGATCA ACAACGACGA CACCGAGGCG
CTGGCGGCCA TCTCGCAGTT CTGGAACGAG GGCTTCCAGT TCGGTGACTC GCTGCCGGAC
GACGAGTCGC TCTACCTCTC GAACGGTGCG TACCTCCTCA CGGACTTCGT TCGCGACCAG
TACGTGACGC TCGAGCGCAA CCCGGACTAC AACGGTGACC GTCCGGCGAA CGTCGAGCGC
GTCACGATCC GCTACAACGG CGACCCGATG GCGTCCCTCC AGGCGCTGCA GAACGGTGAG
GTCGACGTCA TCGAGCCGCA GGCGACGACG GACATCCTCC AGGCCGCCGA GGCGCTGGGT
GAGGACTTCA CGGTGCTGAC CGGCGACGCC GCGACGTACG AGCACATCGA CCTCGCGCAG
AACAACGGCG GTCCGTTCGA CCCGGCTGCC TACGGCGGCG ACGCGGCCAT CGCGCGCGAC
GTCCGTGAGG CGTTCCTGCT CCTCATCCCG CGTGAGGACA TCGTCGACAC GCTGATCCGT
CCGCTCAACC CGGAGGCGAA CGTTCGCCAG ACGAACCTCG CCGTGCCGAG CGCGCCGAAC
TACGACGCGA TCGTGGCGGC GAACGGGTAC GAGGAGGCGT TCCCGGCGGT CGTCGACCAG
TCGTCGATCG ACCGGGCGAC CCAGCTCCTG ACCGACGCCG GCGTCACGAC GCCGATCGAC
GTCCGGATCA TGACGGACTC GCTGAACACC CGCCGCCAGA ACCAGCTGCA GATCATCTCT
GACACGGTCA ACGCGTCGGG TCTGTTCAGC ATCGTCGACG CGTCCAACGC CGACTGGGGC
GCGCTGCTGT CCGACACCTC GCAGTACGAC GCTGCGATCT TCGGGTGGCA GTCGACCGGC
ACGGGTGCGA CGAACTCGGA CGCCAACTAC CGTCCGGGCG CGATCAACAA CTTCTACGGG
TACGACAACC CTGAGGTGAC CGCGCTGCTC GACGAGATCG CCGTGACGAC CGACCAGGAC
ACCGTGACGG AGCTGCAGGG CGAGATGGAG GCGTTCCTGG TTCAGGACGC GTTCGGCCTG
CCGATCTACC AGCACCCGGG TGTCGACGTC TACCGGAACT CGATCGAGGG CATCAACCCG
ATCGCCCTGA GCCCGACCGT GTTCTGGAAC TACTGGGAGT GGGACGTCAC CGGTGACACC
GCCGGCGAGC CCACGTCCGA GGAGGCGACG GAGGAAGCGA CCGAGTAG
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| Protein sequence | MKIRRFAAFG AAVAATALAL SACQSPGSGS DDNGGDDEGL SQDTAVTFGW NQSFYEYNGD
SSTGNATANA IVLYLMNSAF RYFDEDLNIA QDTSFGTYEK TSDDPLTVEY TVNDDVAWSD
GTPVDAADML LSWAATSGHF NTLADEEVET DEEGNVTNQG DNVYFSGTSV ASSYIIPTPE
ISEDGKTITL VYDRPFADWE QGFGIGVPAH VVAMHALGID DATEAKEALI DAINNDDTEA
LAAISQFWNE GFQFGDSLPD DESLYLSNGA YLLTDFVRDQ YVTLERNPDY NGDRPANVER
VTIRYNGDPM ASLQALQNGE VDVIEPQATT DILQAAEALG EDFTVLTGDA ATYEHIDLAQ
NNGGPFDPAA YGGDAAIARD VREAFLLLIP REDIVDTLIR PLNPEANVRQ TNLAVPSAPN
YDAIVAANGY EEAFPAVVDQ SSIDRATQLL TDAGVTTPID VRIMTDSLNT RRQNQLQIIS
DTVNASGLFS IVDASNADWG ALLSDTSQYD AAIFGWQSTG TGATNSDANY RPGAINNFYG
YDNPEVTALL DEIAVTTDQD TVTELQGEME AFLVQDAFGL PIYQHPGVDV YRNSIEGINP
IALSPTVFWN YWEWDVTGDT AGEPTSEEAT EEATE
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