Gene Bcav_1103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1103 
Symbol 
ID7859957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1241721 
End bp1243292 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content73% 
IMG OID643865187 
Productprotein of unknown function DUF195 
Protein accessionYP_002881125 
Protein GI229819599 
COG category[S] Function unknown 
COG ID[COG1322] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.813753 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCA CCGACCTGCT GATCGCGATC GCCGCCCTGG TGATCGGCGG CGCCGTCGGC 
TGGTTCGCGG CCACAGCGCG GGCCGGTAGC GAACGTGCTC GGCTCGGCTC GGACCGCCGA
GCCGCGCAGG AGCGCGCCGC CGCCGCCGAG CGCTCCGCCG AGGCCGCCGA CCGGGCGTGG
GCGGGGCGGC TGGAGGACGA GCGCCGCGTC ACTGCCCGCC GGGTGGAGGA GGAGCGGGAC
GACGCCGACC GTCGGGTCGC GGAGGCCGAG CACCGCGCGG AGGTCCAGCT CGAGCGGGAA
CGCACCGCCG CTCGCGAGCG CGTGGAGGAG CTGCGCGCCG ACTCCAAGCG GCTGGCCGAC
GAGTTCGAGA CACTCTCGCG GAAGGCCCTT GCCGCCAACA CCCAGCAGTT CCTCGCCCAG
GCCGAGGAAC GGCTCAAGCG GACCCAGGTC GAGAGCGCGG CCGAGCTCGC CAAGCGCGAG
CAGGCGGTCA AGCAGCTCGT GGAGCCGCTG ACCCGCACGC TGGGGGACGT GAAGTCCGAG
ATGACCGAGG CCGAGAAGGC GCGGCTCGCG GCGCACACGG CGCTCGCCGA GCAGGTGCGC
GCCATGCAGC AGTCCTCCGA GCAGCTCCGT ACGGAGACGA GCCAGCTCGT CACCGCGCTC
CGGGCACCGC AGGTCCGCGG CCGGTGGGGC GAGCTGCAGC TGCGTCGCAT CGTCGAGGCG
GCCGGCATGG TCGAGCACGT CGACTTCGAG GAGCAGGAGA CGGTGGCCGA CGGCACGCTG
CGGCCGGACC TCGTCGTCAA GCTCCCGGGG CGCAAGCAGA TCGTCGTGGA CTCGAAGGTC
GCCTTCAGCG GCTACCTCGA AGCCATGGAG GCGCGCGACG ACGAGACCCG GGCCAAGCGC
CTGGCGGCGC ACGCTCGGCA CCTGCGCCGG CACATCGACG ACCTCGGCGC GAAGGACTAC
GGGCACCACG TCGAGGGCTC TCCCGAGTTC ACGGTGATGT TCGTGCCCGC CGAGGTGTTC
CTGAACGCGG CGCTCGAACA GGACCCCACT CTGCTCGAGC ACGCCTTTGC GCAGGACGTC
GTCATTGCGA CGCCGTCGAC GCTCGTGGCA CTCCTGCGGA CCGTCGGCTA CACGTGGCGG
CAGGAGATGC TCGCCGCGGA GGCGCAGCAG GTCTTCTCGG TCGGACGCGA GCTGCACAAG
AGGCTCAGCG TGTTCGGCGG GCACCTCTCG ACGCTCGCGA AGCGGCTCAA CTCGACGGTC
GACGCGTTCA ACAAGATGAG CTCGTCGCTC GACAGCCGGG TCGTCACACA GGCCCGCAAG
TTCAGTGCGC TGCAGGGCCT GGAGCCGGAC CTGGACGTGC CCCCGCCCCT CGAGGTCCTC
GCGGTCCCGA GCCAGAAGCC CGACCTGTAC CCCGCGCACC TCGATCCCGA CGAGCCGGTC
AAGCTCCGCA ACGCCGCCGC CGAACGGCGC GCCGTGCTCG ACGCCGACCG CGACGACACC
CTGTTCCTCA TCGAGCGGGC CGCGCCGGGC GACGACGAGC GGCCCGCCGG TCGGGCGAGC
TCCGCGTCCT GA
 
Protein sequence
MDTTDLLIAI AALVIGGAVG WFAATARAGS ERARLGSDRR AAQERAAAAE RSAEAADRAW 
AGRLEDERRV TARRVEEERD DADRRVAEAE HRAEVQLERE RTAARERVEE LRADSKRLAD
EFETLSRKAL AANTQQFLAQ AEERLKRTQV ESAAELAKRE QAVKQLVEPL TRTLGDVKSE
MTEAEKARLA AHTALAEQVR AMQQSSEQLR TETSQLVTAL RAPQVRGRWG ELQLRRIVEA
AGMVEHVDFE EQETVADGTL RPDLVVKLPG RKQIVVDSKV AFSGYLEAME ARDDETRAKR
LAAHARHLRR HIDDLGAKDY GHHVEGSPEF TVMFVPAEVF LNAALEQDPT LLEHAFAQDV
VIATPSTLVA LLRTVGYTWR QEMLAAEAQQ VFSVGRELHK RLSVFGGHLS TLAKRLNSTV
DAFNKMSSSL DSRVVTQARK FSALQGLEPD LDVPPPLEVL AVPSQKPDLY PAHLDPDEPV
KLRNAAAERR AVLDADRDDT LFLIERAAPG DDERPAGRAS SAS