Gene Bcav_1101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1101 
Symbol 
ID7859955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1239283 
End bp1240581 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content74% 
IMG OID643865185 
Productexodeoxyribonuclease VII, large subunit 
Protein accessionYP_002881123 
Protein GI229819597 
COG category[L] Replication, recombination and repair 
COG ID[COG1570] Exonuclease VII, large subunit 
TIGRFAM ID[TIGR00237] exodeoxyribonuclease VII, large subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG TCCCCGTGAC CCCGGAGCGC GCCGAGGGCG GTACCGGCCC GGCGGCACCC 
CGCGCCGCGG CGCCCGGCCA GCGCCCCCCG CTCGCCGCCC GAGCGCTCGA CACCTCGCCG
GAGCACCCGT GGCCGGTCCG CGTGCTCGCC TCGAAGATCT CGGAGTACGT CGACCGCATG
TCGCCCGTGT GGATCGAGGG CCAGGTCGTC GAGCTGAACC GGCGGTCCGG GATGTCGTTC
TTCACGCTCC GGGACACCGA CGCCGACATG TCGCTCAGCG TGACCGCGAT GCCCCGGCTG
ATGGCGGCCA TCGCGACGCC GCTCGAGACC GGCGCCCACG TCGTCGTCCA CGCGAAGCCC
AGCTTCTGGC CCAAGCGCGG CACGCTCACG ATGCAGGCAC GGGACATCCG TGCCGTCGGC
ATCGGCGATC TCCTCGCCCG CATCGAGCAG CTGCGCCGGG TCCTCGCGGC GGAGGGCCTG
TTCGACGCCG ACCGGAAGCG CCCGCTCCCG TTCCTGCCCC ATCGGATCGG CCTGGTGTGC
GGGCGGGAGG CGAAGGCGAA GCACGACGTC GTCGTCAACG CGCGCGACCG CTACCCCGAC
GTGGAGTTCG AGATCCGCGA GGTCGCCGTC CAGGGCGTCA GCGCCGTCGC CGAGGTCTCG
CGCGCGATCG CCGACCTCGA CGCCGACCCG CGCGTCGACG TCATCGTCGT CACCCGCGGC
GGGGGCGCCG TCGAGGACCT GCTGCCCTTC TCCAACGAGG CCCTCGTGCG GGCGGTCGCC
GCGTGTCGCA CGCCTCTCGT GTCGGCGATC GGGCACGAGA CCGACACGCC GCTGCTGGAC
CTGGTGGCCG ACTACCGGGC CTCGACGCCG ACCGACGCCG CGAAGCGGAT CGTGCCGGAC
GTCGCCGGCG AACGGGCGAA CCTCACGCAG GTGCGCTCTC GCATGCGGCG CGCCGTCGAG
CATCGCGTCC GCACCGAGCA GGACCGGCTC GACGCGCTGC GCACGCGACC CGTCCTCGCC
CAGCCGCTCG TGCTCGTGAC GTCCCGTGAA GAGCGTCTCC ACCGTGACCT CGCCACCGCC
CGCCGGGTGT TCGGCCACCG TCTCGAGCAC GCTCGCGCCG ACGTCGCCGG CCTCGCTCAG
GCCGTACGCA CCCTCTCGCC GCAGTCCACG CTCGACCGTG GATACGCCGT GCTGCGGTCG
GACGAGGGCA CCGTGGTGCG TGACCCGGCC GACGTGACCG CCGCCCAGGA GCTCGAGGCC
CTCGTGGCTG GCGGGACCTT CGGCGTCGTC GTGAGATGA
 
Protein sequence
MTDVPVTPER AEGGTGPAAP RAAAPGQRPP LAARALDTSP EHPWPVRVLA SKISEYVDRM 
SPVWIEGQVV ELNRRSGMSF FTLRDTDADM SLSVTAMPRL MAAIATPLET GAHVVVHAKP
SFWPKRGTLT MQARDIRAVG IGDLLARIEQ LRRVLAAEGL FDADRKRPLP FLPHRIGLVC
GREAKAKHDV VVNARDRYPD VEFEIREVAV QGVSAVAEVS RAIADLDADP RVDVIVVTRG
GGAVEDLLPF SNEALVRAVA ACRTPLVSAI GHETDTPLLD LVADYRASTP TDAAKRIVPD
VAGERANLTQ VRSRMRRAVE HRVRTEQDRL DALRTRPVLA QPLVLVTSRE ERLHRDLATA
RRVFGHRLEH ARADVAGLAQ AVRTLSPQST LDRGYAVLRS DEGTVVRDPA DVTAAQELEA
LVAGGTFGVV VR