Gene Bcav_1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1088 
SymbolhemH 
ID7859942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1227203 
End bp1228348 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content74% 
IMG OID643865172 
Productferrochelatase 
Protein accessionYP_002881110 
Protein GI229819584 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0276] Protoheme ferro-lyase (ferrochelatase) 
TIGRFAM ID[TIGR00109] ferrochelatase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.403919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCC CGGTGATTCC GACGACCGAC GTCGCCCCGT ACGACGCGCT GCTCCTCCAC 
TCGTTCGGCG GGCCCGAGGG ACCGGACGAC GTCATGCCGT TCCTGCGCAA CGTCACGGCC
GGCCGCGGCA TCCCCGACGA GCGGCTCGAG CAGGTCGCCG AGCACTACCT GCACTTCGGC
GGGCGCAGCC CCATCAACGA CCAGAACGCC GCGCTGCTGG CGGCACTGCG AGCGGAGCTC
GATCGGCGCG GTGTCACGCT CCCCACGGCG TGGGGCAACC GCAACTGGGA CCCGTTCGTC
ACCGACACGC TGCGTGAGCT GCACGACGCC GGCCACCGCC GGGTGCTCGT GCTCACGACG
AGCGCGTACG CCTGCTACTC CTCGTGCCGG CAGTACGGCG AGGACCTCGC CCGGGCGCTG
GCGACGCTCG AGTCGGAAGG CCGGCAGATC GCCGTCGACA AGGTCCGCCC CTACTTCAAC
TCGCCCGGAT TCGTGACGGC GAACACCGAC GCCGTCCGCG GGGCCGTCGG ATCCCTCGGC
GGGAATGCGC GCACGCCGCA CGTGGTATTC GTCACGCATT CCATCCCGAC CACGATGGAG
GATGCGTCCG GGCGCGACGC GCCGCACGGG GCGACCTACC GCGACCAGCA CCTCGACCTC
GCGCGGGTGG TCGCCGGGCG GCTCGCCGCC GAGGGCGTGC CGATCACGTG GGAGCTGGCC
TTCTGCTCCC GGTCCGGGCC GCCGTCGCAG CCCTGGCTCT CACCGGACGT CAACGACGTG
CTCGAGGCCC GGCACGCGGA GGGGGTCGAC GGCGTGGTCC TCGCCCCGAT CGGCTTCGTC
TCCGACCACA TGGAGGTCGT CTACGACCTC GACACCGAGG CGCGCGAGAC CGCCGAGCGG
CTCGGGATGC GGATGGTCCG GGCCGCCACG GCCGGCACCG CCGAGGAGTT CGTGGCCGGG
CTCGTCGACC TCGTGCTCGA GCGCTGCGGC ACCGAGCGCG GCGAGGCGCC GCAGCGGCCG
GCCGAGGGCG AGATCGGCCC GTGGCCCGAC GCGTGCAGTC CTGGCGGCTG CTGGCGACGT
GACGGCGAGG ACTCCGGCGT CCCCGCCGCC GCGACCCGCG TCGACGCCGA GGCGGTGTCG
GCATGA
 
Protein sequence
MTIPVIPTTD VAPYDALLLH SFGGPEGPDD VMPFLRNVTA GRGIPDERLE QVAEHYLHFG 
GRSPINDQNA ALLAALRAEL DRRGVTLPTA WGNRNWDPFV TDTLRELHDA GHRRVLVLTT
SAYACYSSCR QYGEDLARAL ATLESEGRQI AVDKVRPYFN SPGFVTANTD AVRGAVGSLG
GNARTPHVVF VTHSIPTTME DASGRDAPHG ATYRDQHLDL ARVVAGRLAA EGVPITWELA
FCSRSGPPSQ PWLSPDVNDV LEARHAEGVD GVVLAPIGFV SDHMEVVYDL DTEARETAER
LGMRMVRAAT AGTAEEFVAG LVDLVLERCG TERGEAPQRP AEGEIGPWPD ACSPGGCWRR
DGEDSGVPAA ATRVDAEAVS A