Gene Bcav_1085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1085 
Symbol 
ID7859939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1223022 
End bp1224335 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content72% 
IMG OID643865169 
ProductPhoH family protein 
Protein accessionYP_002881107 
Protein GI229819581 
COG category[T] Signal transduction mechanisms 
COG ID[COG1875] Predicted ATPase related to phosphate starvation-inducible protein PhoH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGCAGC GGCTCACGTA CGTGCTCGAC ACCTCCGTGC TCCTGTCGGA TCCGCGGGCG 
GTCCTCCGCT TCGCCGAGCA CGACGTCGTC CTGCCGGTCG TCGTCGTCAC CGAGCTCGAG
GCCAAGCGCC ACCACGCGGA GCTGGGGTAC TTCGCGCGCA GCGCGCTGCG GCTGCTCGAC
GACCTCCGGG TCAAGCACGG ACGCCTGGAC GCGCCCGTAC CGGTGAACGA CGACGGCGGG
ACGGTGCGCG TCGAGCTCAA CCACTCCGAC CCGCAGGTCC TGCCGGCCGG GCTGCGCCTC
GGGGACAACG ACACCCGGAT CCTCTCCGTG GCGGCGAACC TGCGCGCGGA GGGGACCGAC
GTCGTCGTCG TCAGCAAGGA CCTGCCGATG CGGGTCAAGG CCTCCGCCGT CGGGCTCGCC
GCGGAGGAGT ACCGCGCGCA GCTGGCCGTC GACTCGGGCT GGACCGGGAT GGCCGAGGCC
GACCTCGCCG AGGGCGAGAT GGCCGACCTG TACTCGAACG AGCGCCTCTC GATCGCCGAC
CTCATGAGCC CCGAGGCGGT GCAGGACCTG CCCGTGCACA CCGGTCTCGT GCTGCACTCG
CCACGGGGTT CGGCGCTCGG CCGCGTGACG GTGGACAAGC ACGTGCAGCT GGTGCGCGGG
GACCGCGACG TGTTCGGCGT CCACGGGCGC AGCGCCGAGC AGCGCATCGC GATCGACCTC
CTGCTCGACG AGGAGATCGG CATCCTGTCG CTCGGTGGGC GGGCGGGGAC GGGCAAGTCG
GCGCTCGCGC TGGCCGCGGG CCTGGAGGCG GTGATGGAGC GCCGCTCCCA CCGCAAGGTC
ATGGTGTTCC GGCCGCTGTA CGCCGTCGGC GGCCAGGAGC TCGGCTACCT GCCCGGCAGC
GAGGCCGAGA AGATGAACCC CTGGGCGCAG GCGGTCTTCG ACACGCTCGG CGCGGTTGTC
TCGCGGGAGG TGGTCGAGGA GGTCATGGAC CGCGGCATGC TCGAGGTGCT GCCGCTCACG
CACATCCGCG GGCGCTCGCT GCACGACGCG TTCGTGATCG TGGACGAGGC GCAGTCGCTG
GAGCGCAACG TGCTCCTCAC GGTGCTCTCG CGCATCGGGC AGAGCTCGCG TGTGGTCCTC
ACGCACGACG TGGCGCAGCG TGACAACCTC CGCGTCGGCC GGCACGACGG CGTCGCCGCC
GTGATCGAGG CGCTCAAGGG TCACCCGCTG TTCGCGCACG TCACGCTGAC CCGCTCCGAG
CGGTCGCCCG TGGCGGCGCT CGTCACGGAG ATGCTGGAGG GCGCCGACCT CTGA
 
Protein sequence
MSQRLTYVLD TSVLLSDPRA VLRFAEHDVV LPVVVVTELE AKRHHAELGY FARSALRLLD 
DLRVKHGRLD APVPVNDDGG TVRVELNHSD PQVLPAGLRL GDNDTRILSV AANLRAEGTD
VVVVSKDLPM RVKASAVGLA AEEYRAQLAV DSGWTGMAEA DLAEGEMADL YSNERLSIAD
LMSPEAVQDL PVHTGLVLHS PRGSALGRVT VDKHVQLVRG DRDVFGVHGR SAEQRIAIDL
LLDEEIGILS LGGRAGTGKS ALALAAGLEA VMERRSHRKV MVFRPLYAVG GQELGYLPGS
EAEKMNPWAQ AVFDTLGAVV SREVVEEVMD RGMLEVLPLT HIRGRSLHDA FVIVDEAQSL
ERNVLLTVLS RIGQSSRVVL THDVAQRDNL RVGRHDGVAA VIEALKGHPL FAHVTLTRSE
RSPVAALVTE MLEGADL