| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1083 |
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| Symbol | |
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| ID | 7859937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 1220998 |
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| End bp | 1221747 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643865167 |
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| Product | Hly-III family protein |
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| Protein accession | YP_002881105 |
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| Protein GI | 229819579 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACAG CGCAGCAGCC GGGCACGGGC GACCCCGCGC CCTCCAGCGG CGCCGTGCCG
CACGACTCCG CGAGCGACGA GGCCGAGCAG ACCGTCCCGG CCGCCGTCGT CGCCGCGATC
AAGCCGCACC TGCGGGGCTG GATCCACGCC GGGATGACGC CCTTCGTCGT CGCCGCCGGG
ATCGTGCTCG TCGCCCTCTC ACCGACTCCC GCCGCGCGGG TCAGCACCGG CGTGTTCGCC
CTGGCCACGA CGCTGCTCTT CACGATGAGC GCCGTCTACC ACCGCGGGAC CTGGAGCGCC
CGCGTCGCCG CCGTCCTGCG GCGGTTCGAC CACGCGAACA TCTTCCTGGT CATCGCCGGC
ACCTACACCC CCCTCGCCGT CCTCCTGCTG CCGACCTCCA CGGCGACCAC GCTCCTGCTC
GTCGTCTGGG GCGGGGCCCT CGCCGGCATC CTCGCCCGGG TCTTCTGGCT CGGCGCGCCA
CGATGGCTGT ACGTGCCGAT CTACCTCGCG CTCGGCTGGG TCGCCGTGTG GTTCCTCCCC
GCGTTCGGTC GCGCCGGGTC CCCGGCGATC ATGTGGCTCG TCATCGCCGG CGGACTCGGC
TACACGGCCG GCGCCGTCGT CTACGCCCTC AAACGGCCCA ACCCTTCTCC GCGCTGGTTC
GGGTTCCACG AGATCTTCCA CGTCGGCACG CTCATCGGCT ATGTGTGCCA CTACATCGCC
GTCGCGATGG CCTCCTTCGC CCTGCGCTGA
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| Protein sequence | MATAQQPGTG DPAPSSGAVP HDSASDEAEQ TVPAAVVAAI KPHLRGWIHA GMTPFVVAAG
IVLVALSPTP AARVSTGVFA LATTLLFTMS AVYHRGTWSA RVAAVLRRFD HANIFLVIAG
TYTPLAVLLL PTSTATTLLL VVWGGALAGI LARVFWLGAP RWLYVPIYLA LGWVAVWFLP
AFGRAGSPAI MWLVIAGGLG YTAGAVVYAL KRPNPSPRWF GFHEIFHVGT LIGYVCHYIA
VAMASFALR
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