Gene Bcav_1082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1082 
Symbol 
ID7859936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1219991 
End bp1220944 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content72% 
IMG OID643865166 
Productprotein of unknown function DUF344 
Protein accessionYP_002881104 
Protein GI229819578 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGAAAGA AGAAGGCGAA GGGCACGACG ACGACCGCCG CGCAGGCCGT GCGGATCGGC 
GACGGCTTCC GGCTGGCGGA CGTCGACGCA GCGGCCACGC CCGGATGGAC GGGCGACCGT
GCCCAGGCGG AGGCACGCAC CCAGGAGCTC GGACGCGAGA TGTCCGAGCT GCAGGAGCGC
CTCTTCGCGC ACGGCCGCAC GGGCGGCACG CAGGCCGTGC TGCTCGTGCT CCAGGGGCTC
GACACGTCCG GCAAGGGCGG CGTCGTCCGC CACGTCATCG GCATGGTCGA CCCGCAGGGC
GTCGCGCTCG CCTCGTTCGG CGTCCCGACG GCGGAGGAGC TCCGGCACCA CTACCTGTGG
CGGATCCGGC GCGCGCTGCC CCCGCCCGGG CGCATCGGCG TCTTCGACCG CTCGCACTAC
GAGGACGTCC TCGTGGTGCG CGTCGACGAG CTGGTGCCGC GCGAGACGTG GGAGCAGCGC
TACGACGAGA TCAACCGGTT CGAGCGCCAG ACGGCGGAGC GCGGCATCCG GATCATCAAG
GTCGCCCTCG TCGTGTCCGA GGCCGAGCAG TACGCGCGTC TGCGCGAACG GCTCGAGCGC
CCGGACAAGC ACTGGAAGTA CAACCCGTCG GACCTCGCCA CCCGCAAGCG CTGGCCGCTG
TACCGCGACG CGTACCAGGA CGTCTTCGAT CGCACGTCAA CCGACCTCGC CCCGTGGCAC
GTGGTCCCCG CGGACCGCAA GTGGTACGCG CGTCTCGCGG TCTCGGAGCT CCTCGTGGAG
GCATTGCGGG ACCTTCAGCT CGACTGGCCG GTGGCCGACT ACGACGTCGC CGCGGAGCTC
GCGAAGCTCG ACGCGACGGC GCCCGCCGGC TCGGCGTCCG CGAGCGGCGC CACCACGAGC
AGTCCGAAGG CCAGCAAGAA GGCCGGCAAG AAGAGCGGCA AGAAGAAGAA GTGA
 
Protein sequence
MGKKKAKGTT TTAAQAVRIG DGFRLADVDA AATPGWTGDR AQAEARTQEL GREMSELQER 
LFAHGRTGGT QAVLLVLQGL DTSGKGGVVR HVIGMVDPQG VALASFGVPT AEELRHHYLW
RIRRALPPPG RIGVFDRSHY EDVLVVRVDE LVPRETWEQR YDEINRFERQ TAERGIRIIK
VALVVSEAEQ YARLRERLER PDKHWKYNPS DLATRKRWPL YRDAYQDVFD RTSTDLAPWH
VVPADRKWYA RLAVSELLVE ALRDLQLDWP VADYDVAAEL AKLDATAPAG SASASGATTS
SPKASKKAGK KSGKKKK