Gene Bcav_1053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1053 
Symbol 
ID7859827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1193714 
End bp1194610 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content70% 
IMG OID643865138 
Productprotein of unknown function DUF1112 
Protein accessionYP_002881076 
Protein GI229819550 
COG category[S] Function unknown 
COG ID[COG4760] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.933646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.796254 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAACC CGTACTTCAA CAACGATCCG TTCTTCGGGG ACGGCAAGGG CCAGCAGCGG 
CGCGGAGGCC AGCCGGGTGC GTACCCGGGT GCCGCCGGGC AGCAGGGCTA CCCGGGCGTG
CCGCAGGCCG GGCAGTCGGC GGCCGGTGCG ACCGGCACGA TGGCGCCGGC ATACGACCTG
GAGCAGGCGT ACAACATGCC GGCCGCGGGT CCCGCGCAGA CCGGCCGCAT GACGTATGAC
GACGTCATCA TCCGCACGGG TTCGCTGCTC GGGATCATCG TCGTCACCGG TGCGCTCGCG
TGGTTCGGCC CGCAGGCGCT CGGCGCCCCG CAGCTCGTCT GGCCGCTCAT GCTCGTCGGT
GCGATCGGCG GCCTCGTGCT CGGCCTGGTG AACTCGTTCA AGCGCGAGCC GTCGCCGGCG
CTCATCGTCG GGTATGCCGC CCTCGAGGGT CTGTTCCTCG GCGGCATCTC CGGCATCTTC
GAGACGATGT ACCCCGGGAT CGTCGTGCAG GCGGTGCTTG CGACGTTCGC CACGTTCGGC
GCGACGCTCC TGCTGTTCCG GAGCGGCAAG ATCCGGGTCA CGCCCAAGTT CCAGCGGATC
GTGCTCGTGG CGCTCGTGGG GTACGCGTTC TTCTCGCTGA TCAACCTCGG CCTCATGCTG
TTCGGCGTCA TGGACGGCTG GGGGATGCGC GAGGGCCCGA TCGGCATCCT CATCGGCGTC
GCCGCGGTCA TCCTCGCCGC GGCCTGCCTC GTGATCGACT TCGACGCGAT CAAGCGCGGC
ATCGAGCGCG GCGCACCGGC CAAGTACGCC TGGGCGGCCG CGTTCGGCCT CACCGTCACG
CTCGTCTGGA TGTACCTCGA GTTCCTGCGG CTCCTGGCGA TCCTCCGCGG CGACTGA
 
Protein sequence
MSNPYFNNDP FFGDGKGQQR RGGQPGAYPG AAGQQGYPGV PQAGQSAAGA TGTMAPAYDL 
EQAYNMPAAG PAQTGRMTYD DVIIRTGSLL GIIVVTGALA WFGPQALGAP QLVWPLMLVG
AIGGLVLGLV NSFKREPSPA LIVGYAALEG LFLGGISGIF ETMYPGIVVQ AVLATFATFG
ATLLLFRSGK IRVTPKFQRI VLVALVGYAF FSLINLGLML FGVMDGWGMR EGPIGILIGV
AAVILAAACL VIDFDAIKRG IERGAPAKYA WAAAFGLTVT LVWMYLEFLR LLAILRGD