Gene Bcav_1050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1050 
Symbol 
ID7859824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1190101 
End bp1191366 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content74% 
IMG OID643865135 
Producthistidine kinase 
Protein accessionYP_002881073 
Protein GI229819547 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.400402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.183218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCTCGT CCTCGGCGCC GGAGTTCACC GAGCTCAACG CGCGACGGCT CGGCCCGGTC 
CGGCGCTACT TCGTCCGTCA CCCCGTGGCG ATGGACCTCC TGGTCATGGC GTGGTTCGGG
ATCCCCTCGT TCCTCACCGT CGTCCTGGTG CCGGAGGGGA CTCCCCGCGG CGTCGTCGTC
GGCGCGATCG CCTCGGTGCT CGCGACGGCG GCTCTGTGGT TCCGGCGTCG ACGTCCCCTC
GCGACGCTCG CCGTCGTCAC GGTCCTCGGT GTCGTCACGA CGGTCGCGAT GTCGCAGACC
GCCGGCTTCG AGCTCGCCGT CGCGCTCGGG GTGTACGCCG TCGCCGCCTC GCGACCGGCG
CACGTGGCCT GGCTGGCGCT CGGCGCGAGC GTCGCCACCC TGGGCACCAC CCAGGTGCTC
GTCGACGCGC CGACGAACCT CGAGGCGGTC GCCGCCGCCT CCCCCGACCC GACCGACTGG
GACGTGTTCC GCGTCACGAG CGTCACGGCG ATCGTCCTCT GGGCGGTCAT CGCCCTGGCC
ATCGGCATCG GCGTCCGCAA CCGGCGCCTG CACATCGGTG CTCTCATCGA CCGCGCCAAC
CAGCTGGCGC TCGAGCGCGA CCAGCGCGAG CAGCTCGCCG TCGCCGCCGA GCGGGCGAGG
ATCGCGCGCG AGATGCACGA CGTCGTCGCC CACTCCCTCT CCGTGATGAT CACACTGGCC
GACGGCGCCC AGGCGATCCT CGAGAAGAGC CCCGACCGGG CGCGCACGGC GATGGACGAC
GTCGCCGAGA CCGGGCGCTC CGCCCTCGGC GACATGCGAC GCGTGCTCGG CGCGCTCCGG
GACGACGAGG CCACCGGCGC CATGCTCGAA CCGCAGCCGA CCGAGGGGAT CGGGGAGCTC
GTCGACCGCT TCCGCGCGGC CGGGCTGCCG GTCCACCTCA CCACGTCCGG CGTGGCGCTC
CCCGCGGACG CCGGCCTCCG GCTCGCCGTC TACCGCATCC TCCAGGAGGC GTTGACCAAC
GTGCTGCGGT ACGCGCCGCT CGCCCCGTGG ATCGAGGCGG CTGTCGCGAC GACGCCCGAC
GGCGTCGTCG TCCGTGTCTC CAACGGCGGT GGGTCGATCC CCGGCGAGGG ACGCCAGGGC
TCCGGGAAGG GGCTCATCGG CATGCGTGAG CGGGTGGCCG TGTTCGGCGG CTCGATCGAG
GCCGGGCCGA CCCTGTCCGG CTGGCAGGTG CGCGCGCTGC TGCCGTGGCG GGAGGATGAG
GTGTGA
 
Protein sequence
MSSSSAPEFT ELNARRLGPV RRYFVRHPVA MDLLVMAWFG IPSFLTVVLV PEGTPRGVVV 
GAIASVLATA ALWFRRRRPL ATLAVVTVLG VVTTVAMSQT AGFELAVALG VYAVAASRPA
HVAWLALGAS VATLGTTQVL VDAPTNLEAV AAASPDPTDW DVFRVTSVTA IVLWAVIALA
IGIGVRNRRL HIGALIDRAN QLALERDQRE QLAVAAERAR IAREMHDVVA HSLSVMITLA
DGAQAILEKS PDRARTAMDD VAETGRSALG DMRRVLGALR DDEATGAMLE PQPTEGIGEL
VDRFRAAGLP VHLTTSGVAL PADAGLRLAV YRILQEALTN VLRYAPLAPW IEAAVATTPD
GVVVRVSNGG GSIPGEGRQG SGKGLIGMRE RVAVFGGSIE AGPTLSGWQV RALLPWREDE
V