Gene Bcav_1033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1033 
Symbol 
ID7859807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1175505 
End bp1176320 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content70% 
IMG OID643865118 
ProductABC transporter related 
Protein accessionYP_002881056 
Protein GI229819530 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.556918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.107765 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTACCG AAGCAGCCAT CCGGGTGCAG GGAATCGAGA AGGCGTACGG GGAGCTCTCC 
GTGCTACGGG GCGTGGACTT CGACGTCGCG CGGGGCAGCA TCTTCGCCCT GCTGGGGTCG
AACGGCGCGG GCAAGACCAC GCTCGTGCGC ATCCTGTCCA CGCTGCTCAA GGCGGACGCC
GGGGCGGCGA GCGTGCACGG GTTCGACGTC GCCTCGCAGG CCGGCGACGT GCGCGAGTCC
ATCAGCCTGA CGGGCCAGTT CGCGGCCGTC GACGAGGTGC TCACCGGGCG GGAGAACCTC
GTGCTGATCG CGAAGCTGCG GCACCTGAAG AACCCGGGCG CGATCGCCGA CGACCTGCTC
GGCCGCTTCT CGCTGACCGA CGCCGGGAGC CGCCCGGCGT CGACGTACTC CGGTGGCATG
CGGCGTCGGC TCGACATCGC GATGAGCCTG ATCGGCAACC CGCCGATCAT CTTCCTCGAC
GAGCCGACGA CGGGTCTGGA CCCGCAGGCG CGCATCGACG TCTGGCAGAC CGTGAAGCAG
CTCGCCCACG GCGGCACCAC GGTGCTGCTC ACCACGCAGT ACCTCGACGA GGCCGAGCAG
CTCGCCGACC GCATCGCGAT CCTCCACCGG GGCACGATCA TCCAGAACGG CACGCTGGCG
GAGCTCAAGG CGCTGCTCCC GGCCGCGAAG GTCGAGTACG TCGAGAAGCA GCCGACCCTC
GAAGAGGTCT TCCTCACCCT CGTCGGCGAG ACCGGCGAGA CGGACACGAC CGCCGGCACG
GACGCCGCTG CAGCGGCAGG AAAGGAATCC CGATGA
 
Protein sequence
MSTEAAIRVQ GIEKAYGELS VLRGVDFDVA RGSIFALLGS NGAGKTTLVR ILSTLLKADA 
GAASVHGFDV ASQAGDVRES ISLTGQFAAV DEVLTGRENL VLIAKLRHLK NPGAIADDLL
GRFSLTDAGS RPASTYSGGM RRRLDIAMSL IGNPPIIFLD EPTTGLDPQA RIDVWQTVKQ
LAHGGTTVLL TTQYLDEAEQ LADRIAILHR GTIIQNGTLA ELKALLPAAK VEYVEKQPTL
EEVFLTLVGE TGETDTTAGT DAAAAAGKES R