Gene Bcav_1025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1025 
Symbol 
ID7859798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1169016 
End bp1169345 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content71% 
IMG OID643865109 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_002881048 
Protein GI229819522 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.282121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0207022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCA CCCAGCTGCT GAAAGGGGTG CTCGACCTGG CCGTGCTGGC CGTGGTCGAG 
CGGGAGGACT CGTACGGGTA CGACGTCGTG CGTCGGCTCC GGTCGGCGGG CCTCGCCGAG
GTGGGGGACG CCTCGGTGTA CGGCACGCTC CGGCGTCTGT ACGCCGCCGG GGCGCTCACG
AGCTACGTGG TGCCGTCCGA CTCCGGGCCG CACCGCAAGT ACTACGGCGT GACGGCGCAG
GGCCGTGCCG CCCTCGACGC GCAGACCAAG CAGTGGCACG AGTTCGCCGT GACGATGACC
GACCTTCTCG ACCTGGCGGA GGCCTCCTGA
 
Protein sequence
MDTTQLLKGV LDLAVLAVVE REDSYGYDVV RRLRSAGLAE VGDASVYGTL RRLYAAGALT 
SYVVPSDSGP HRKYYGVTAQ GRAALDAQTK QWHEFAVTMT DLLDLAEAS