Gene Bcav_1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1020 
Symbol 
ID7859793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1164434 
End bp1165069 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content76% 
IMG OID643865104 
Productprotein of unknown function DUF501 
Protein accessionYP_002881043 
Protein GI229819517 
COG category[S] Function unknown 
COG ID[COG1507] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0462853 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGGATT CGACTCAGGA GCCGTCGGGC GCCGCGGCCC ACCGCGACCG GCCCGGCCGG 
TCGGCGGGTA CCCCGGCACC GAGGCACGCC GCCAGCGGCC GCCACGCCGG GCGCATCAGC
GGCACGGGGA TCCCGAGCGC CGTCGGCAGC AACACCGTCG ACGACGTCGA CCTCGCGGTG
GTCGCGGAGC AGCTGGGCCG AGGTCCCCGC GGAGTCGTCG GGATCGCGGC CCGGTGCGTG
TGCGGCCGGC CGACGGTCGT CCGCACGGCA CCGCGGCTCG AGGACGGCAC GCCGTTCCCC
ACGACGTACT ACCTCACGCA CCCGCGGGCG GTCGCGGCGA TCTCGACGCT CGAGGCGGGC
GGCGTCATGG CGGAGATGAC GCGCCGCCTC GCCGAGGATC CTGACCTCGC CGCCGCCCAT
CGGGCCGCCC ATGAGGACTA CCTGCGCCGC CGCGCGGAGC TCGGCGACGT GCCGGAGATC
GCGAACATCT CCGCCGGGGG GATGCCCGCG CGGGTGAAGT GCCTGCACGT GCTCGCGGCG
CACGCCCTCG CCGTCGGCCC GGGCGTCAAC GTGCTCGGCG ACGAGACGCT CGCCCTGATC
GAGCCGGAGT GGCGTCCCAC GCGCTGCACC TGCTGA
 
Protein sequence
MEDSTQEPSG AAAHRDRPGR SAGTPAPRHA ASGRHAGRIS GTGIPSAVGS NTVDDVDLAV 
VAEQLGRGPR GVVGIAARCV CGRPTVVRTA PRLEDGTPFP TTYYLTHPRA VAAISTLEAG
GVMAEMTRRL AEDPDLAAAH RAAHEDYLRR RAELGDVPEI ANISAGGMPA RVKCLHVLAA
HALAVGPGVN VLGDETLALI EPEWRPTRCT C