Gene Bcav_1017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1017 
Symbol 
ID7859790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1161393 
End bp1162103 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content76% 
IMG OID643865101 
Productnucleoside triphosphate pyrophosphohydrolase 
Protein accessionYP_002881040 
Protein GI229819514 
COG category[R] General function prediction only 
COG ID[COG3956] Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain 
TIGRFAM ID[TIGR00444] MazG family protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0439129 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCCC GCGCGACCGA TTCCGAGCGG GCCGCCGCGG CATTCGCCGA GCTCGTCGTC 
ACGATGGACC GGCTCCGCTC GCCGGGCGGG TGCCCGTGGG ACGCCGAGCA GACCCACGCC
TCGCTCGCGC CGTACGCGAT CGAGGAGGCG TACGAGGTGG CGGAAGCCGC CGAGTCGGGC
GCGGGCGCCG CCCTGCGCGA GGAGCTCGGA GACCTCCTGT TCCAGCCGGT GTTCCAGGCG
CGCATCGCCC AGGAGGGCGA CGACCCGTGG GACATCGCCG ACGTCGTCGA GGGTCTCGTC
GCGAAGCTGC GGTTCCGCCA CCCGCACGTG TTCGGGCGTG ACGGGGACGA CGACGACGCG
GAGCCCGCTG TCGATGCGGC GGCGGTCCGC GGGATGTGGG ACGAGCTCAA GGCGGCCGAG
CACGAGGCGA AGGGGAACGG TCGGCGCGGC GTGCTCGACG GGATCCCGGC GTCGCTGCCC
GCCCTCGCGC GCGCTCAGAA GGTGATGAGC CGGGCGCGGA AGGCGGGGTA CGCCGTCGGC
CCCGATCCCG ACGCCCCTGC TGACGACCTG ACGGCGGAGA TCGGTGCCGA CGTGCTCGCC
GTCGTCGCTC GAGCGGCGGC GCTGGGCGTC GACGCGGAGG CGGCGCTGCG CGGGCAGGTC
CGCGCCGTGG AGCGCCAGGT GCTCGAGGCC GAGGCCGCCG CCGGGGGCTG A
 
Protein sequence
MNARATDSER AAAAFAELVV TMDRLRSPGG CPWDAEQTHA SLAPYAIEEA YEVAEAAESG 
AGAALREELG DLLFQPVFQA RIAQEGDDPW DIADVVEGLV AKLRFRHPHV FGRDGDDDDA
EPAVDAAAVR GMWDELKAAE HEAKGNGRRG VLDGIPASLP ALARAQKVMS RARKAGYAVG
PDPDAPADDL TAEIGADVLA VVARAAALGV DAEAALRGQV RAVERQVLEA EAAAGG