| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1010 |
|---|
| Symbol | |
|---|
| ID | 7859783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 1150295 |
|---|
| End bp | 1152214 |
|---|
| Gene Length | 1920 bp |
|---|
| Protein Length | 639 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643865094 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002881033 |
|---|
| Protein GI | 229819507 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0384863 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTATC GATCCCTGTC GCGCGACCGG AGCGTGACGA GGCAGAAGCT CGCGCCCGGC
ACCGTGCGCC GCATCCTGCG CTACGCACGG CCGTACCGCT TCCTCGTGGC CGGGTTCCTC
GTGCTCGTCG TCCTCGGCGC CCTGCTCATC GTCGCGACGC CGCTGCTGCT GCAGCGGATC
GTCGACGACG GCGTGGCCCA GGGGAACCGC GGCCTGGTGA TCGGGCTCGC CGGCGCCGTC
GCCGTCGTCG CCCTCCTCGA GGCGGGGCTC GGCGTCCTGC AACGCTGGCT CTCCGTGCGC
ATCGGGGAGG GGCTGATCTT CGACCTGCGC ACCGACGTCT TCGCCCACGT GCAGCGACAG
TCGGTCCAGT TCTTCACCCG CACGCAGACC GGGTCGCTGG TGACCCGCCT GAACTCCGAC
GTGATCGGGG CGCAGCAGGC GTTCACGTCG ACGCTCTCGG GCGTCGTCTC GAACCTCATC
TCGGTGGTTG TGGTGCTCGT CACGATGTTC ACGCTGTCGT GGCAGATCAC GCTGCTCTCC
CTCGTCGTCG TCCCGTTCCT GCTGCTGCCC GCGCGGCGCG TCGGGCGCCG GCTCGCCGGT
CTGACCCGTG AGGGGATGCA GCTCAACGCC GAGCTCGGCA ACCGGATGAC GGAGCGCTTC
AACGTCGCGG GCGCCATGCT CGTCAAGCTG TTCGGCTCGC CGGACCGCGA GGACGCCGAG
TACGCGGACC GCGCGGGCCG GGTACGGGAC ATCGGCGTCC GGACGGCGAT GAGCAGCCGC
GTGTTCTTCG CGGCGCTGGG CGCGATGGCC GCGCTCGCGA CGGCGGCCGT CTACGGCGTC
GGCGGCGTGC TCGCGATCGC CGGTTCGCTG ACCATCGGCG CGCTCGTCGC GTTCGCGGGG
CTGCTCGGGC GCCTGTACGG TCCGGTCGCG TCGCTGAGCA ACGTGCAGGT CGACGTCATG
ACGGCGCTCG TCTCGTTCGA GCGGGTCTTC GAGGTGCTGG ACCTCCAACC GGCGATCGAG
GACCGTCCGG ACGCCGTCGA CCTCCCCGAC GGGCCGCTGC GGGTGGAGCT GGCGGACGTC
CGGTTCGCCT ACCCGTCGGC GGCGACGGCG TCCCTCGCCT CGCTCGAGGC GCCCGGGGAC
GCCGACGACG GCGCCGCGCC CGTCGCGCCG TCGTCGTGGG GTGCCGAGGG GGAGGCGGAG
ATCCTGCACG GGGTCTCGCT CGCCGTCGAC CCGGGCCACG TCCTGGCGCT CGTCGGACCG
TCGGGCGCCG GGAAGACGAC CATCGCGAAC CTCGTGGTGC GCCTGAACGA CCCGACGTCC
GGCGTCGTGC GCATCGGCGG TCACGACCTG CGCGACGTGC GGCAGGGCGC CGTCCACGAG
GCCGTCGGCA TGGTCACGCA GGACGCGCAC ATGTTCCACG ACACCGTGCG CGCGAACCTG
GCGTACGCGC GGCCGGACGC GTCCGAGGCC CAGATGTGGG ACGCGCTGCG GGGAGCCCAC
GTGGACGACG TCGTCACGCG CCTGCCGCAG GGGCTCGAGA CGGTCGTGGG GGAGCGGGGT
CACCGCCTGT CCGGCGGCGA GAAGCAGCGG CTCGCGATCG CGCGACTGCT GCTCCGCGCC
CCTCGGGTGG TCGTGCTCGA CGAGGCGACG GCGCACCTGG ACTCCGAGTC GGAGGCGGCC
GTCCAGCGCG CCCTCGACGC GGCGATGACG GGGCGGACGT CGATCGTCAT CGCGCACCGG
CTCTCCACGG TGCGGCGCGC GGACGAGATC GTCGTCGTCG ACGCGGGGGT CGTCGTCGAG
CGCGGGACGC ACGCGGAGCT GCTGGCGGCG CGCGGCCTGT ACGCGGAGCT GTACGCGACG
CAGTTCGCCG GGGCCGACGT CGCGCCCGCG GGCGCCGGCG GCGCGACGCC GACCGACTGA
|
|---|
| Protein sequence | MTYRSLSRDR SVTRQKLAPG TVRRILRYAR PYRFLVAGFL VLVVLGALLI VATPLLLQRI
VDDGVAQGNR GLVIGLAGAV AVVALLEAGL GVLQRWLSVR IGEGLIFDLR TDVFAHVQRQ
SVQFFTRTQT GSLVTRLNSD VIGAQQAFTS TLSGVVSNLI SVVVVLVTMF TLSWQITLLS
LVVVPFLLLP ARRVGRRLAG LTREGMQLNA ELGNRMTERF NVAGAMLVKL FGSPDREDAE
YADRAGRVRD IGVRTAMSSR VFFAALGAMA ALATAAVYGV GGVLAIAGSL TIGALVAFAG
LLGRLYGPVA SLSNVQVDVM TALVSFERVF EVLDLQPAIE DRPDAVDLPD GPLRVELADV
RFAYPSAATA SLASLEAPGD ADDGAAPVAP SSWGAEGEAE ILHGVSLAVD PGHVLALVGP
SGAGKTTIAN LVVRLNDPTS GVVRIGGHDL RDVRQGAVHE AVGMVTQDAH MFHDTVRANL
AYARPDASEA QMWDALRGAH VDDVVTRLPQ GLETVVGERG HRLSGGEKQR LAIARLLLRA
PRVVVLDEAT AHLDSESEAA VQRALDAAMT GRTSIVIAHR LSTVRRADEI VVVDAGVVVE
RGTHAELLAA RGLYAELYAT QFAGADVAPA GAGGATPTD
|
|---|
| |