| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1004 |
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| Symbol | |
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| ID | 7859777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 1141992 |
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| End bp | 1143536 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 643865088 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_002881027 |
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| Protein GI | 229819501 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0175607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCACG CCACGCGGGC GCGCACGGAC GACGGCCGGG GAGCCGGCCC GCCCGGCGGG
TCGCTGCGCA CGCGTGCGGC CCGTGGGGCG CTCGTGACGC TCGCGGCACA GGCCCTGCGC
ATCGTCCTGC AGCTGGCCGG CGTCGTCCTG CTCGCACGGC TCCTGCTCCC GTCCGACTAC
GGACTCGTGG CGATGGTGAT GGCGCTCATC GGCGTCGCCG AGATCTTCCG CGACCTCGGC
CTGTCGTCGG CGGCCGTGCA GGCCGAGCAC CTCAGCCGGG CGCAGCGCGA CAACCTGTTC
TGGGTCAACA CCGCCGCGGG TGGTGTGCTG GCCCTCCTCG TGGTCGCCGT CGCCCCGCTC
ATCGCGCGGT GGTACGCGGA GCCCGAGCTG GTGGACCTGG CGAGAGCGCT CGCGCCCGTC
TTCCTCCTGA ACGGGCTCGC CACGCAGTTC CGGGCCGACC TCACCCGGCG GATGCGGTTC
TCGCGGATCG CGACGGCCGA CGTCCTGGCC CCGTGCCTCG CGCTCGGCGC CGCCATCGCC
GTCGCCGCGG CGGGCGGCGG CTACTGGGCG CTCGTCACCC AGCAGCTGAC GACGGCGGTC
GTGCTGCTCG TGGTGCTCGC CGTCTCCGCG CGGTGGTGGC CGCGCTGGTA CACGCGGGAC
GCCCCGATGC GCGAGCTGCT GTCGTACGGC TGGCACCTCG CCGGTTCGCA GCTCATCGGG
TACGTCGCCC GGAACATCGA CTCCGTGACG ATCGGGACGC GGTTCGGCGC CACCCCGCTC
GGCTTGTACA ACCGCGCGTT CCAGCTGCTC ATGACGCCGC TCGCGCAGCT GCGCAACCCG
ACGGTGACCG TGGCGTTGCC CGTGCTCTCG CGCATCCGGG AGTCCCGGTC CGAGACGGAC
GCGTTCGTCC GCCGGGGGCA GCTCGCGCTC GGCCTCACGC TCGTGGCGGG CCTCGGCGTC
GTCGCCGGGG CGGCGGCGCC GCTGACCGCC ATCATGCTCG GACCGGCGTG GGAGGCCGCC
GAGCCGTACC TGCGGCTGCT CGCCGCGGCG GGGGCCTTCC AGACGCTGGC CTACGTCGGG
TACTGGGTGT ACCTGGCGCA CGGACTCACC AAGGAGCTGC TGCGGTACTC GATCGTGAGC
GCGGCGCTGA CGGTGACGTG CGTGCTCGTC GGGAGCATCG GCGGTCCGGT GGGTGTGGCC
TGGGGCTTCC TGGCGGCGAC GGCGCTCGAG TGGCCGATCT CGTTCTGGTG GCTCTCGCGC
AAGGCGAACG TGTCCGTGCG GCCGCTCGTG ATCGGCGCCC TGCGCATCGT CGCGCTCGCG
GCGGTGCTCG GCGTGGCCGC GTGGGCGGCG TGCACGCTCG TCGGGCCGTC GGCGCCGTGG
GTCCAGCTCG CGGCAGCGGT CGGAGCGGCG GGTGTCGTGT ACGTCGTGGC GCTCGCGCTG
CCGTCCTACC GGCGGGACGT GCGCGACGTC GTGGCCGTCG TGCGCGCGGG CCTGGCGGCC
CGGCAGAGCC GTGCGCCGGA ACCGGTGGGA GCGAGCGATG GGTGA
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| Protein sequence | MTHATRARTD DGRGAGPPGG SLRTRAARGA LVTLAAQALR IVLQLAGVVL LARLLLPSDY
GLVAMVMALI GVAEIFRDLG LSSAAVQAEH LSRAQRDNLF WVNTAAGGVL ALLVVAVAPL
IARWYAEPEL VDLARALAPV FLLNGLATQF RADLTRRMRF SRIATADVLA PCLALGAAIA
VAAAGGGYWA LVTQQLTTAV VLLVVLAVSA RWWPRWYTRD APMRELLSYG WHLAGSQLIG
YVARNIDSVT IGTRFGATPL GLYNRAFQLL MTPLAQLRNP TVTVALPVLS RIRESRSETD
AFVRRGQLAL GLTLVAGLGV VAGAAAPLTA IMLGPAWEAA EPYLRLLAAA GAFQTLAYVG
YWVYLAHGLT KELLRYSIVS AALTVTCVLV GSIGGPVGVA WGFLAATALE WPISFWWLSR
KANVSVRPLV IGALRIVALA AVLGVAAWAA CTLVGPSAPW VQLAAAVGAA GVVYVVALAL
PSYRRDVRDV VAVVRAGLAA RQSRAPEPVG ASDG
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