Gene Bcav_1002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1002 
Symbol 
ID7859775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1138959 
End bp1140326 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content73% 
IMG OID643865086 
Producthypothetical protein 
Protein accessionYP_002881025 
Protein GI229819499 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00716202 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACCTCGA CGGCGACTCG CACCGCCGCG CCCCCGACGA CGACGGCGCC AGCGGCGCGG 
CCGGGGGCGC AGGCGTTGTC CTGGGTCCTC GCGGTCGGGG TGCCCGCCGC GATCGCGAGC
CGGTTCGTCG TCGCGATGAG CGTGACGGTA GGCCAGGTCC TCAGCGTCGC ACTGGCCCCC
GTCTGGGTCC CGACGCTGAA GCGCTTCGTG GGCGCCCGAC TGCTCGCCGT GGTGGGCCTG
GCATGCGGCG TGTCCGGGGT GTGGCTCACG GCGTTCGCGC AGGCCACGCA TCCCGTCTCG
CGGCCCAACC TCGTGGCCAA CACGATGCTC CTCGTCGGGA TCGTGTGCGG GGTCGGAGCG
TTGCTGTGGT CACGGACGGT GGTCAGCGAG AGGCTCATCG GGCTCGCGTA CGGTGCCGGC
CTCCTCGTCG AGCTCGTGCT CAAGAACGAC CCCCGCACGG CGGAGAACCC CTGGAAGTTC
GGGATCGCCG TTCCCCTGTC GGTGCTGCTG CTCTCGGTCG TGAACCGGTC CGGCCGGCGG
GCATGGGAGG TCGTCGTCCT CCTCGCGCTC GCCGGGGTCA GCATCGCGTT CGACTCCCGC
TCGGCGTTCG CCATCTACCT GCTCTCGGCG TTCCTCGTCG CAGCGCAGGC GGTGTGGGCA
CGGCCCGGCC TGCGTTCGTC GGTCCGCGGC CGCGCCGCCG CGATCGCGCT CGTCGTCGTC
GCCTCCGCCG CCGTCCTCTA CGCCGTCGGG TCGCGGCTGC TCCTCCTCGG GTATCTCGGC
GCCGAGGCGC AGGAGCGGTC GATCGCGCAG GCGACGACGA GCGGCTCGAT CATCGTCGGC
GGCCGCCCGG AGATGGCGGC GACGTGGGCG CTGTTCCTGC ACCGGCCGTG GGGCTTCGGG
GCGGGGACGC TGCCGACGCT CGGCGACATC CTCGTCGCGA AGTCGGGGAT GTGGTCGATC
AACTACCAGC CGGACAACGG CTACGTCGAG GAGTACATGT TCGGCGGCAC GATCCGCCTG
CACTCCGTCG TGGGCGACCT CTGGGCGCAG TTCGGGATCC CCGGCATCGC CCTGGCACTG
CTCATCATCG GCATCGCGCT GCGCGCCCTC GTCGTCCGGC TGGCCTCCGG CACCGCCAGC
GGGATCGCCG TGTTCGCGAC GTGCACGATG CTCTGGAACA TGCTCTTCGG GCCGATCTAC
GGCACGGCGC CCCTGATCGT GCTGGCGCTC GGCCTCACGA TGCTGCCCCG CGAGGGGCCG
GCGTGGGATC CGGACGTGAC GCAAGGTCCC CGGGCCGCGG GCCGACCGGT CACCTCCGCT
CAGCGGGACG CTGCCCGCCG CACGGCGTCG ACGACGCGGT CCGCGTAG
 
Protein sequence
MTSTATRTAA PPTTTAPAAR PGAQALSWVL AVGVPAAIAS RFVVAMSVTV GQVLSVALAP 
VWVPTLKRFV GARLLAVVGL ACGVSGVWLT AFAQATHPVS RPNLVANTML LVGIVCGVGA
LLWSRTVVSE RLIGLAYGAG LLVELVLKND PRTAENPWKF GIAVPLSVLL LSVVNRSGRR
AWEVVVLLAL AGVSIAFDSR SAFAIYLLSA FLVAAQAVWA RPGLRSSVRG RAAAIALVVV
ASAAVLYAVG SRLLLLGYLG AEAQERSIAQ ATTSGSIIVG GRPEMAATWA LFLHRPWGFG
AGTLPTLGDI LVAKSGMWSI NYQPDNGYVE EYMFGGTIRL HSVVGDLWAQ FGIPGIALAL
LIIGIALRAL VVRLASGTAS GIAVFATCTM LWNMLFGPIY GTAPLIVLAL GLTMLPREGP
AWDPDVTQGP RAAGRPVTSA QRDAARRTAS TTRSA