| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1000 |
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| Symbol | |
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| ID | 7859773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 1135659 |
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| End bp | 1137791 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643865084 |
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| Product | Parallel beta-helix repeat protein |
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| Protein accession | YP_002881023 |
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| Protein GI | 229819497 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.349147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00938388 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCACGTC TCCCGCACCT GTCCACCAGC CTCCGGGCGC TGTCCGTCGG CGTCGTCGCC
GGGTTCGCGC TCGCCGCAGT GGGCTTCCAG GTCGCCGCGT ACGCGGACGA CGGCGGGCTG
TTCGCGCCGG CCGAGACGAC GCGTGTGCTG CCCGGGACTG ACGTCGCAGC GGCGTCCTCG
GTCGGGATCG ACCTCGGGGA GGTCCCCGAG GGCGCGAGCG AGGCGTGGCT CCAGGTCACG
GCACGGCCCT CGGACGGCGC CGGCGAGCTC CGGCTGTGCG GCGACGGTGC GACGTGCGCC
GACCCAGCGG TCGTGGCCAC GTCGCCCGAC CGGACGGCGG CGGACCTCGT CCGTGTCCCG
GTCGGTGACG ACCTGACGCT CTCGGCGACG TCCGCGACGC GGGTGTACGC CGATCTGGTC
GGCTTCACCG TGGGCCCGGG CGCGGACGAC GGCGCGAGCT TCGTCTCCCA GGTGCCGACG
AGGGCCGCCG AGGGCCTGGA GCTCGGGGAA CGGTCCTCGG CGGTCGTGCC GCTGGAGGGC
GTGCCGGCAG GGAGCGTCGC CGCAGCCGTG ACGCTCACCG TCTCCGACGC GGCCGCTCCC
ACCTACGTGG CGCTGTGCGC CGCCGGCGGC GAGGACTCGA CGTGCTCGCG GACGTCGGCG
ATCAGCGTGG ACGACGCCGA GGAGCGGACG GTCTCGACGA TCGTGCCCGT CGACTCCTCG
GGCGAGGTCC TCGTGTACAA CAACGGCGGC GCGGCGCGCG TCGACCTCGA CGTCACCGGC
TGGTTCGTCC CCGGGACGGA CGGCGCGACG TACGTCCCGA GCAGTGCGCG CGCGCAGGGG
ACGGCCACCG TGTGGGCCCC GCGGACGTTC GACCTCGACG TCCCCGAGGG CACCACCGCC
GCCCTGGCGC AGGTCACCCT GTCCGGCGCC TGGCGTCCCG CCCAGCTCGC CGCCTGCCCG
GGCGACGCCA TCCAGGGAGC GTGCGCGGAC AGCCGCGTCG CGTCGACGCA CGCGACACCG
GGCCGCGGGG CGACGACGAC AGCCGTGCTG CCCGTGGACG ACCAGGGGCG CGTCACGGTC
CAGGCGCACG ACGCGAGCGT CCGGGTGCGG ATCGACGTGC TCGCCGTCTT CGCCGGAGGT
CCCGTGACCC CAGCGCCCGA GCCGACCCCG ACACCCGAGC CGACCCCGAC GCCGAAGCCG
ACCCCGACGC CGGAACCCAG CCCGGAGCCC ACGCCGGCCC CGGAGCCGAC TCCGACACCG
GAACCGAGCC CGGAGCCCAC CCCCGAGCCC ACGCCGGAGC CGACCCCGGA GCCCACGCCG
GAGCCGACGC CCACGCCGTC GCCGGAGCCG CCGGCCGGCG GGCAGCCCGG TCCGTCGAAC
ACGGGCGTCC CTGCCGGTAC CCAGCTCCAG GTCCACCAGG GTGACCTCAC GGTCACGCAG
CCCGGCACCG TCATCGACGG GCTGGACGTC CGGGGGATCG TGCGGGTCAG GGCAGCCGAC
GTCACGATCC GGAACTCGAT CGTGCGCGGC AACGGTGCGA TCACGTTCTC GACGGGCCTC
GTGCACAACT ACTCGACGGG CCTGGAGATC ATCGACACCG AGATCGCGGC AGACGTGCGC
ACGTCGTCGG TGAACGGCGT GATGGGGTCG AACATGACAC TGACGCGCGT CGACATCCAC
AACGTCGTCG ACCAGGTCCA CGTGTACGGC GCCGGGAACG TCGTGGTCCG CGACTCGTGG
CTGCACGACA ACTTCCACGA CGAGGACGAC CCGAACTGGG GCGGCGGGCC GAGCCACGAC
GACAACGTCC AGATCGTCTC CGGTCGCGGG ATCCGCGTGA CCGGGAACAC GCTCGAGGGC
GCGTACAACG CCGGCGTGCA GGTGACGCAG GACGGCGGGC GGGTCTCCGA CGTCGTCGTG
AGCGGCAACT GGGCGAGCGA CGGCGGCTGC ACGATCAACC TCGCCGAGAG CGGCGTGGGG
GCGCTGACCG GGATCTCGGT CACCGACAAC GTGTTCGGTA CCGGCCAGCG CGTGCCCGGC
TGCGCGATCG TGCGTCCCGC GAGCTCCCCG GTGACGCTCG ACGGCAACAC GTGGGCCGCG
AGCGGCGAGG AGGTCGTGGC GAAGCGCGGC TGA
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| Protein sequence | MARLPHLSTS LRALSVGVVA GFALAAVGFQ VAAYADDGGL FAPAETTRVL PGTDVAAASS
VGIDLGEVPE GASEAWLQVT ARPSDGAGEL RLCGDGATCA DPAVVATSPD RTAADLVRVP
VGDDLTLSAT SATRVYADLV GFTVGPGADD GASFVSQVPT RAAEGLELGE RSSAVVPLEG
VPAGSVAAAV TLTVSDAAAP TYVALCAAGG EDSTCSRTSA ISVDDAEERT VSTIVPVDSS
GEVLVYNNGG AARVDLDVTG WFVPGTDGAT YVPSSARAQG TATVWAPRTF DLDVPEGTTA
ALAQVTLSGA WRPAQLAACP GDAIQGACAD SRVASTHATP GRGATTTAVL PVDDQGRVTV
QAHDASVRVR IDVLAVFAGG PVTPAPEPTP TPEPTPTPKP TPTPEPSPEP TPAPEPTPTP
EPSPEPTPEP TPEPTPEPTP EPTPTPSPEP PAGGQPGPSN TGVPAGTQLQ VHQGDLTVTQ
PGTVIDGLDV RGIVRVRAAD VTIRNSIVRG NGAITFSTGL VHNYSTGLEI IDTEIAADVR
TSSVNGVMGS NMTLTRVDIH NVVDQVHVYG AGNVVVRDSW LHDNFHDEDD PNWGGGPSHD
DNVQIVSGRG IRVTGNTLEG AYNAGVQVTQ DGGRVSDVVV SGNWASDGGC TINLAESGVG
ALTGISVTDN VFGTGQRVPG CAIVRPASSP VTLDGNTWAA SGEEVVAKRG
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