| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0998 |
|---|
| Symbol | |
|---|
| ID | 7859771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 1133385 |
|---|
| End bp | 1134323 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643865082 |
|---|
| Product | glycosyl transferase family 2 |
|---|
| Protein accession | YP_002881021 |
|---|
| Protein GI | 229819495 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00565096 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGACCACGG CGCAGCGGAC GAGGCTCCGG GTCTCGATCT GCACCCTCAC GTTCCGGCGA
GCCGAGGACC TGCGGCGGGC CCTGCCGATG CTCGTCGAGC AGGCCCGGAG CGTGGCGCAC
GACGTCGAGG TGCTCGTCAT CGACAACGAC ACGGCGGCGA GCGCCGTCGA CGTCGTCCTC
GAGGACGGGT CGGGGCTCGT GCGGTACGTC CACGAGCCCA GGCCCGGCAT CGCGGCGGCG
CGCAACCGCG CGCTGGCGGA GACGCTCGGA CGCGACCTCG TCGTCTTCAT CGACGACGAC
GAGCGCCCCG TGCAGGACTG GCTCGCCCAG CTCCTGGCGA CGTACCTGCG CACGCGACCG
GCCGGCGTCG TCGGCCCGGT GGTGTCGGAG TTCGACGAGG CGCCGGAGCC GTGGATCGTG
GACGGGCAGT TCTTCACCCG GCTGCGCCAC CCCACCGGGA CCCGCGTCGC CGTCGCCGCG
ACGAACAACC TGCTGCTCGA CCGCGCGTTC CTCGCCCGGC ACGGCCTCAC CTTCGACGAG
CGGTTCGGCC TCAGCGGTGG GTCGGACTCG CTGCTCACCC GGCGGCTGAC GCAGGCCGGT
GGCGTGCTCG TCTGGTGCGA CGAGGCCGGT GTCGTCGACG TCGTCCCCGC AGCCCGGGCG
ACCCGCTCGT GGGTGATGCG GCGCGCGTTC CGGATGGGCA ACACGGCCAC GCGCGTCGAG
CTCGAGGTCG CCGCGCGTCC GGCCGGTCGC GCGGCGGGTC GCGTCCGCAT GGCGACCCGC
GGGGCGGTGC GCATCGCCGG CGGGGCCGCC CGGGCCGCCG TCGGCGCCGT CACCGTGTCG
CGCGGGCGCC GTGCCCGCGG CTGGCGCACC GTGGCGCGCG GGGCCGGGAT GCTCGCCGGG
ACCACCGGCT ACGTCTACCA CGAGTACCGC CGCGCCTAG
|
|---|
| Protein sequence | MTTAQRTRLR VSICTLTFRR AEDLRRALPM LVEQARSVAH DVEVLVIDND TAASAVDVVL
EDGSGLVRYV HEPRPGIAAA RNRALAETLG RDLVVFIDDD ERPVQDWLAQ LLATYLRTRP
AGVVGPVVSE FDEAPEPWIV DGQFFTRLRH PTGTRVAVAA TNNLLLDRAF LARHGLTFDE
RFGLSGGSDS LLTRRLTQAG GVLVWCDEAG VVDVVPAARA TRSWVMRRAF RMGNTATRVE
LEVAARPAGR AAGRVRMATR GAVRIAGGAA RAAVGAVTVS RGRRARGWRT VARGAGMLAG
TTGYVYHEYR RA
|
|---|
| |