Gene Bcav_0987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0987 
Symbol 
ID7859760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand+ 
Start bp1120697 
End bp1121677 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content70% 
IMG OID643865071 
Productribose-phosphate pyrophosphokinase 
Protein accessionYP_002881010 
Protein GI229819484 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0462] Phosphoribosylpyrophosphate synthetase 
TIGRFAM ID[TIGR01251] ribose-phosphate pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00257813 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGGTA TCACGACCTA CGGCGAGAAG CGGCTGGTGC TGATCTCGGG CCGCGCACAC 
CCCGAGCTCG CGGCGAACGT GGCTTCCGAG CTCGACGTCG AGATCGTGCC GACCACCGCG 
TACGACTTCG CGAACGGTGA GGTCTACGTC CGCTTCGCGG AGAGCGTCCG CGGCGCCGAC 
GCGTTCGTGC TGCAGAGCCA CACGGCGCCG ATCAACCAGT GGATCATGGA GCAGCTCATC 
ATGGTGGACG CGCTCAAGCG CGCCTCCGTC AAGCAGATCA CCGCGATCCT CCCGTTCTAC 
GGGTATGCCC GGCAGGACAA GAAGCACCGG GGCCGCGAGC CGATCTCCGC GCGGCTCGTC 
GCCGACCTGT TCAAGACGGC GGGCGCCGAC CGGCTCATGT CGGTGGACCT TCACGCGGCG 
CAGACGCAGG GCTTCTTCGA CGGCCCGGTC GACCACCTGT GGGCGATGCC GATCCTCGTG 
GACTACGTGC GCGGCCGGGT GAACACCGAG AACGTCACCG TCGTGTCGCC CGACGCCGGC 
CGCATCCGCG TCGCCGAGCA GTGGGCGGCG AAGCTCGGCG GCGGACCGCT CGCGTTCGTG 
CACAAGACGC GCGACATCCA CCGGCCGAAC CAGGCGGTCG CGAACCGCGT CGTCGGCGAG 
GTCGAGGGCC GCGACTGCGT GCTGGTCGAC GACCTCATCG ACACCGGGGG CACGATCGCG 
GAGGCGGTGC GCGTCCTGCT GCACCAGGGC GCGAACTCGG TGATCGTGGC CGCGACGCAC 
GGCGTGCTCT CCGACCCGGC GTCCCAGCGG CTCGCCGAGT GCGGTGCGAG CGAGGTCGTC 
GTCACGGACA CGCTGCCGAT CCCGCCCGAG AAGCGGTTCG CCCAGCTCAA GGTGCTCTCG 
ATCGCGCCGC TGCTAGCGCG GGCGATCCGC GAGGTGTTCG ACGACGGGTC GGTCACCTCG 
CTGTTCGACG GCAACGCCTG A
 
Protein sequence
MTGITTYGEK RLVLISGRAH PELAANVASE LDVEIVPTTA YDFANGEVYV RFAESVRGAD 
AFVLQSHTAP INQWIMEQLI MVDALKRASV KQITAILPFY GYARQDKKHR GREPISARLV 
ADLFKTAGAD RLMSVDLHAA QTQGFFDGPV DHLWAMPILV DYVRGRVNTE NVTVVSPDAG 
RIRVAEQWAA KLGGGPLAFV HKTRDIHRPN QAVANRVVGE VEGRDCVLVD DLIDTGGTIA 
EAVRVLLHQG ANSVIVAATH GVLSDPASQR LAECGASEVV VTDTLPIPPE KRFAQLKVLS 
IAPLLARAIR EVFDDGSVTS LFDGNA