Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0980 |
Symbol | |
ID | 7858201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 1113546 |
End bp | 1114085 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643865063 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_002881003 |
Protein GI | 229819477 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00189308 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATCGGC CAGACGCGGC GCCCGACGAG GTCGACCGGA TCGTCGACGC CTGGGAGGCC GAGCGGCCCG ACCTCGACGT CGAGCCGCTG CGGATCTTCT CCCGGGTGCA CCGCCTGGCT CGGCACCTCG ACCGGGCGCG GCGTCGCGCC TTCGAGGCGC ACGACCTCGA GCTGTGGGAG TTCGACGTGC TCTCGGCGCT GCGCCGCGCG GGGGCGCCGT ACGAGCTGAC GCCAGGGCGG CTCATCGCCG AGACGCTCGT CTCGTCCGGG ACCATGACGA ACCGCATCGA CCGCATGAGC GCCCGCCGTC TCGTCGCGCG GCGGAGCTCG GACGACGACC GCCGCATCGT GCTCGTCAGC CTGACGTCCG ACGGCAAGGA GCGCGTCGAC GCCGCGATGG CCGGGCTCCT CGACCGGGAG CGGGCTCTGC TCGCCGGGCT GAGCGCCGGG GAGCGCGACT CGCTCGCCGA GATGCTGCGC GCCGTCCTGC GGCCGTTCGA CGCACCTGCC GCGACCCGAC CGGAAGGACA CCCCTCGTGA
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Protein sequence | MDRPDAAPDE VDRIVDAWEA ERPDLDVEPL RIFSRVHRLA RHLDRARRRA FEAHDLELWE FDVLSALRRA GAPYELTPGR LIAETLVSSG TMTNRIDRMS ARRLVARRSS DDDRRIVLVS LTSDGKERVD AAMAGLLDRE RALLAGLSAG ERDSLAEMLR AVLRPFDAPA ATRPEGHPS
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