Gene Bcav_0980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0980 
Symbol 
ID7858201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1113546 
End bp1114085 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content74% 
IMG OID643865063 
Producttranscriptional regulator, MarR family 
Protein accessionYP_002881003 
Protein GI229819477 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00189308 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATCGGC CAGACGCGGC GCCCGACGAG GTCGACCGGA TCGTCGACGC CTGGGAGGCC 
GAGCGGCCCG ACCTCGACGT CGAGCCGCTG CGGATCTTCT CCCGGGTGCA CCGCCTGGCT
CGGCACCTCG ACCGGGCGCG GCGTCGCGCC TTCGAGGCGC ACGACCTCGA GCTGTGGGAG
TTCGACGTGC TCTCGGCGCT GCGCCGCGCG GGGGCGCCGT ACGAGCTGAC GCCAGGGCGG
CTCATCGCCG AGACGCTCGT CTCGTCCGGG ACCATGACGA ACCGCATCGA CCGCATGAGC
GCCCGCCGTC TCGTCGCGCG GCGGAGCTCG GACGACGACC GCCGCATCGT GCTCGTCAGC
CTGACGTCCG ACGGCAAGGA GCGCGTCGAC GCCGCGATGG CCGGGCTCCT CGACCGGGAG
CGGGCTCTGC TCGCCGGGCT GAGCGCCGGG GAGCGCGACT CGCTCGCCGA GATGCTGCGC
GCCGTCCTGC GGCCGTTCGA CGCACCTGCC GCGACCCGAC CGGAAGGACA CCCCTCGTGA
 
Protein sequence
MDRPDAAPDE VDRIVDAWEA ERPDLDVEPL RIFSRVHRLA RHLDRARRRA FEAHDLELWE 
FDVLSALRRA GAPYELTPGR LIAETLVSSG TMTNRIDRMS ARRLVARRSS DDDRRIVLVS
LTSDGKERVD AAMAGLLDRE RALLAGLSAG ERDSLAEMLR AVLRPFDAPA ATRPEGHPS