Gene Bcav_0974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0974 
Symbol 
ID7858195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1107094 
End bp1108533 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content75% 
IMG OID643865057 
ProductTransglycosylase domain protein 
Protein accessionYP_002880997 
Protein GI229819471 
COG category[S] Function unknown 
COG ID[COG3583] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.564871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0145438 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGTTG CGGTGAAGGG GCTGCCACCG CTCGTGCCCG GGCCCCGCGA CGTCTGGACG 
ACTGTGACGA CACCCCGCGA CAACGACCTG CCCGAACCCG ACGCCCCTGA CGCAGGCGGC
GACATCCCGG CGATTCCCGA GAACACCGAC GCGCGCCCGC TCGGCCAGCT GAGCCTCTTC
GCGGCGCCCG GCGCCGCAGA CGGCGCCGCC CCCACCTTCG ACGCCCCCGT GGCGAGCGAG
CCCGCCCCGG CCACCGGCCT CGGTGGCGCG TGGCAGCGCG CCCGGGCGCG CTTCCCGCGG
CTGGCGACGC CGCTGGTCGC CTCGGTGGCC GCGTTCGTGC TCGTCGGCGG CGCCGGCGCA
GCCGTCGCGG CGACGTCGCA CAAGACCGTC GACCTCGACG TCGACGGCGA GCAGGTGGCG
ATCTCGACGT TCGCCGGCTC CGTCGAAGGT CTCCTCGAGC AGCAGGGGAT CGAGCTCGGG
GAGCACGACC TCGTCGAGCC CGCCCTCGAC GTCGCCCTGG CCTCGGGCGA CGAGATCGTC
GTGCGGCACG CGCAGCAGGT CGCCGTCGTC GTCGACGGCG AGGAGCAGAG CGTCTGGACC
ACGGCGCTCG ACGCCGGCGA GGCGGTCGCC GACCTGGCCG GGTCCGGGCG CGACGTCACG
ATGGTGGCGT CCCGAGCGGG CACCCGCGCC GAGCTCGACC TGCCGCTGGT CGTCGACGGT
CGCGTCGTCA TCTCCGTCGA CGGCGAGGTG CAGGAGGTGC TGGTGCGCGG CGCCGCCACG
GTGCACGACG TCCTCGAGCA GGCGGGCGTC GAGCTCCGTC GCGCCGACAC GGTCGAGGTC
GGGGCACGCG AGGACGGCAC GCCGCTCGTC ACGATCGCGC GGGTGGACGT CACGCGGCGC
GTGACCACGG AGGCGATCCC GTTCTCCTCG AGCGAGGTCT CCAGCGACGA CTACTACGAG
GGCACCTCCC GGGTGACCAC CGAGGGCGTG GACGGCGCGA TCGAGCGCCG CTACACCGTG
ACGACGATCG ACGGCGTCGA GGTCTCGGCG GAGCTGACGC TCGAGTTCGT GAGCCAGCGG
CCCGTCGACG AGGTCGTGAC GGTCGGCACG GCCGCCCGCC CGGCGCCCCA GCCCTCGACT
CCCGCACCCG CTCCTGGCGG CGGGGGTGGC GGCGGTGGTG GCGGTGGCGG CACCGTCCCG
GTCGGCGACG TCTGGGCCGC TCTCGCGCAG TGCGAGTCCG GCGGCAACCC CGCGACGAAC
ACCGGCAACG GCTACTACGG CCTGTACCAG TTCTCGCTGG GCACGTGGCA GTCGGTGGGC
GGCTCCGGCC TCCCGTCGGA CGCCTCTGCC GAGGAGCAGA CGATGCGCGC CCAGATCCTC
CAGCAGCGCT CCGGCTGGGG CCAGTGGCCG GCCTGCGCAC GCAAGCTGGG GCTGCTCTGA
 
Protein sequence
MPVAVKGLPP LVPGPRDVWT TVTTPRDNDL PEPDAPDAGG DIPAIPENTD ARPLGQLSLF 
AAPGAADGAA PTFDAPVASE PAPATGLGGA WQRARARFPR LATPLVASVA AFVLVGGAGA
AVAATSHKTV DLDVDGEQVA ISTFAGSVEG LLEQQGIELG EHDLVEPALD VALASGDEIV
VRHAQQVAVV VDGEEQSVWT TALDAGEAVA DLAGSGRDVT MVASRAGTRA ELDLPLVVDG
RVVISVDGEV QEVLVRGAAT VHDVLEQAGV ELRRADTVEV GAREDGTPLV TIARVDVTRR
VTTEAIPFSS SEVSSDDYYE GTSRVTTEGV DGAIERRYTV TTIDGVEVSA ELTLEFVSQR
PVDEVVTVGT AARPAPQPST PAPAPGGGGG GGGGGGGTVP VGDVWAALAQ CESGGNPATN
TGNGYYGLYQ FSLGTWQSVG GSGLPSDASA EEQTMRAQIL QQRSGWGQWP ACARKLGLL