| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0969 |
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| Symbol | |
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| ID | 7858190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 1101227 |
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| End bp | 1101802 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 643865052 |
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| Product | isopentenyl-diphosphate delta-isomerase |
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| Protein accession | YP_002880992 |
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| Protein GI | 229819466 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1443] Isopentenyldiphosphate isomerase |
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| TIGRFAM ID | [TIGR02150] isopentenyl-diphosphate delta-isomerase, type 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0417204 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGATGCC ACGTGGCCAC AGACGACGAC GTCGTCCTCC TCGACGCGAC CGGCGCACCC
TCGGGGTCGG CTCCTCGGAG CGCGGTGCAC GGTGCGGCGA CCCCGCTCCA TCTGGCCTTC
TCGTGCCACG TCCAGGACGC CGCGGGGCGC GTGCTCGTGA CCCGGCGCGC GCTGGGCAAG
CGGACGTGGC CCGGCGTCTG GACCAACGCC GTCTGCGGGC ACCCCCGTCC GGGTGAGCGC
GTGGGCGACG CGGTGGTCCG GCGCGCCCGT GAGGAGCTCG GGGCGCATCT CGGGGGCCTA
CGACTCGTGC TGCCGGAGTT CCGCTATCGC GCGGTGGACG CCTCCGGCGT GGTCGAGAAC
GAGGTCTGCC CGGTGTACGT CGCACGGCTC GAGGGCGACC TGCGCCCGGA CCCCGCCGAG
GTGATGGAGG TGACCTGGGC CGAGCCCACG GAGCTCGGCG AGGCGATCCG GCTCGCGCCG
TGGGCGTTCA GCCCGTGGCT CGTGCTCCAG GCGCGGGAGC TGGAGCTCCT GGGCGGGAGG
GTCGACGTCG GCGCGTCGGC GGGTGGTCGC TCGTGA
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| Protein sequence | MGCHVATDDD VVLLDATGAP SGSAPRSAVH GAATPLHLAF SCHVQDAAGR VLVTRRALGK
RTWPGVWTNA VCGHPRPGER VGDAVVRRAR EELGAHLGGL RLVLPEFRYR AVDASGVVEN
EVCPVYVARL EGDLRPDPAE VMEVTWAEPT ELGEAIRLAP WAFSPWLVLQ ARELELLGGR
VDVGASAGGR S
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