Gene Bcav_0962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0962 
Symbol 
ID7858183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1093204 
End bp1095315 
Gene Length2112 bp 
Protein Length703 aa 
Translation table11 
GC content77% 
IMG OID643865045 
Producthypothetical protein 
Protein accessionYP_002880985 
Protein GI229819459 
COG category[R] General function prediction only 
COG ID[COG3973] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.916066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.251911 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCCCG AGCACACCAC GACCACCCGC GCCGTCGCCG AGGAGCAGTC GTTCCTGGAC 
CGCGCCGCCG ACCGCCACCG GCAGCTGCTG ATCCGCCTCG ACGGCGAGCT GACCCACGCC
TCGTCGCGTG ATGCGACGGA GCGAGCTCGC CACGCCGTGC TGCGCAGGCG CCGGGCCGAG
CTCGCCGGCG GCGAGCGCGG ACTCGTGTTC GGCCGGCTCG ACGGGCTCGA CGGGACCTCG
CGCCGCATCG GCCGGGTCGG GCTGCCGGGC GTGGACGACG ACGAGCCGCT CGTCGTCGAC
TGGCGCGCCC CCGCGGCGCA CGCGTTCTAC ACCGCCACTC CGCTCGACCC GCAGGGACTC
ACCCGCCGCC GGCACATCCG CACCGAGGGT GCTCGCGTGG TCGCGGTCGA CGACGAGGAG
CTCGCCGGTG CGGCAGGCGC CGACGGCGGC GACCTCGTGG GCGAGGGTGC GCTGCTCGCC
GCGCTCGACG AGCGGCGCAC GGGACGGATG GGGACCGCCG TCGCCACCCT CCAGCGGGAG
CAGGACGCGA TCGTGCGGGC GGGCGCGGAG GGCCCGCTCG TCGTCCAGGG AGGACCCGGC
ACCGGCAAGA CGGTGGTCGC GCTGCACCGG GTCGCCTACC TGCTGTTCAC GCAGCCCCAG
CTCGCCGAGC GCGGTGTCCT CGTGCTCGGG CCGTCCCGGC GGTTCCTCGA CTACATCGGG
CAGGTGCTTC CGGCGCTCGG GGAGACCGCC GTCGTGTCCG CGACCTGCGA GACCCTGCTC
GCCGGCGTCC GGGTCGAGCG CGCGGAGTCC CGGGAGCTCG CCGAGATCAA GGGTCGGGCC
GTGTGGCAGG GCGCGCTGAC GGCGTACGTC GAGCAGCTCG TGCCCGAGGC CGGTGACCTC
TCGCTGACGT TCGACGGCGA GACGTACGTC CTCCCGGAGG CCCAGATCGG TGCGGCGCTG
CGTGCCGCCC GCAGCGGAGG GCAGCCGTAT CACGCCGCGC GCCGGCACGT CGTCGAGACG
GTGCTCGGCC TGCTCGCCGA CGCCGTCGCC GACCGGAGTG CGCAGCTGCT CGCTCAGGCG
GAGGAGGGGT TCGAGGACGT GCTGGGCCGG CTGGATGCCC AGCTCGCCCG CGCCGACGAC
CGCGGCGCAC GCAGCGGCGT GACGGGGTCG GAGGTCGACG GCGTGATGTC GGACGACGAC
GTCGACGAGC TGCGCGAGCG CCTGGGCGAG GACCGCGCCG TCGCGGCGGC CCTGGCGGTG
TGGTGGCCGA CGCTGGACGC CGGTCGCACG CTCGCCCGGT TCCTGCACGA CGAGGCCCTG
CTCGGCGAGC TCGTCCGCGG CCTCAGCGAC GCGGAGCGGC GCGCCGTCGC GGCGGAGCCC
GGTGGCTGGT CCGCCGGGGA CGTCGCGCTG CTCGACGCCG TCGCTGACCT GCTCGGGGAC
GTGGCGGAGC CGGACGAGCA GGGCGAGTTC CTGGCGGACA CCGCCGCCGC GCGCCGCGAC
TGGGCGTACG GCCACGTCGT CGTCGACGAG GCCCAGGAGC TGTCCGCGAT GCAGTGGCAC
ATGGTCCTGC GCCGCTGCCC GACCCGGTCG ATCACCGCCG TGGGCGACAT CGACCAGGCC
GAGGCGCCGC ACCGGCACAC CACCTGGGTC GAGGCCGTGG CGGTGCTCGG CGAGCGGTGC
CGGCGCGCCG ACCTCACGAT CTGCTACCGC ACCCCGCGCG AGGTGATGGC GCTCGTCGAG
CCGGTGCTGC GTGCCGCCGG CAGCGCCACC GCGCCGCCGC GGGCCGTCCG GTCCTCCGGG
CGGGAGCCGT GGCAGGTCCA GGCGCGTGAG GATGCGCTGG TCGACGTCGT CGCGGCGCGG
GCGGGCGAGC TCGCCGAGCG GTACGCCGGC GGGCGCGTGG GCGTCGTCGC ACCGGCGTCC
CGGGCCTTGG AGCTGCGCCG CGCCCTCGAC GGCGTCCCGG TGCTCACGGC TCTCGAGGCG
AAGGGGCTGG AGTGGGACGC CGCGCTCGTC GTCGACCCGG ACGGCATCGC CGCGCAGCCG
CGGGGGTGGA ACGGCCTCTA CGTCGCCCTG ACGCGCTGCA CGCAGGAGCT CGGGCAGGTC
GTGGTGCGCT GA
 
Protein sequence
MRPEHTTTTR AVAEEQSFLD RAADRHRQLL IRLDGELTHA SSRDATERAR HAVLRRRRAE 
LAGGERGLVF GRLDGLDGTS RRIGRVGLPG VDDDEPLVVD WRAPAAHAFY TATPLDPQGL
TRRRHIRTEG ARVVAVDDEE LAGAAGADGG DLVGEGALLA ALDERRTGRM GTAVATLQRE
QDAIVRAGAE GPLVVQGGPG TGKTVVALHR VAYLLFTQPQ LAERGVLVLG PSRRFLDYIG
QVLPALGETA VVSATCETLL AGVRVERAES RELAEIKGRA VWQGALTAYV EQLVPEAGDL
SLTFDGETYV LPEAQIGAAL RAARSGGQPY HAARRHVVET VLGLLADAVA DRSAQLLAQA
EEGFEDVLGR LDAQLARADD RGARSGVTGS EVDGVMSDDD VDELRERLGE DRAVAAALAV
WWPTLDAGRT LARFLHDEAL LGELVRGLSD AERRAVAAEP GGWSAGDVAL LDAVADLLGD
VAEPDEQGEF LADTAAARRD WAYGHVVVDE AQELSAMQWH MVLRRCPTRS ITAVGDIDQA
EAPHRHTTWV EAVAVLGERC RRADLTICYR TPREVMALVE PVLRAAGSAT APPRAVRSSG
REPWQVQARE DALVDVVAAR AGELAERYAG GRVGVVAPAS RALELRRALD GVPVLTALEA
KGLEWDAALV VDPDGIAAQP RGWNGLYVAL TRCTQELGQV VVR