| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0943 |
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| Symbol | |
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| ID | 7858164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 1059269 |
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| End bp | 1061410 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 643865026 |
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| Product | glycoside hydrolase clan GH-D |
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| Protein accession | YP_002880966 |
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| Protein GI | 229819440 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.929701 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACCGCC CGGCGTGGCG GTTGCGGACG GCGTCGACGA CGCTGGAGCT CGCCGCGGCG
CCGGACGAGC TCGGCCCGGT GCTCGTGGAC TGGTACCCGG ATCCGGCGTC TCCCGGCGAG
GCGCGGGCGG TCCCCGGCGC CGAGGGACAC GGCGTGGGCG GCTTCGCGAC TCCGGCGGAC
CGGCTCCCGC TGCTCTACAC GGCACTCGGG ACCCGCCACA CCCGGGCCGC GGAGCTCGCG
GTCGACCACG GCTCCGGGCT CGTCGGCGCG CGGCTGCGGT GCACGGACGT CGCGAGCGCG
TCGCTGCCGG ACGGCGGCGA CGAGCTGCGC GCGTCGTTCG TGGACTCGAC GGGTCACGTG
GCGGTCGAGC TCGACGTCGT CACGCACCCG GAGCACGACG TCGTGGAGCT GCGGTCCCGC
GTGACGAACA CCGGCGACGC GCCGCTCGTG CTCGACCGAG CGCTCACCGC TGCGCTGGCG
CTGCCGGTCG GGCCGGGCGC CGTCGTCGAC CTCCTCGGCG GTCACTGGTC GCGCGAGTTC
TCGCCCTTCC GGGTGGACCT GCCGGCGGGG GAGCTGGCGA TCGGGAGCCG CCAGGGGATC
ACGTCGCACA CGTACTCGCC AGTCGTCACC GTCACGTCGC GCGACCCGTC CGAGCGAGGA
CTCCGGACCG AGGGACGAGC GCAGGAGGAT CGCGACCGAG AACACCACCG TGCGTACGGC
GTCGCACTGG CGTGGAGCGG ATCGTGGCGG ATGGTCGTCG ACGCCGCGCC GTTCCGGCCC
GACGTCCGGG TGAGCGGCGG CGCGGGCGAC GACGCGACGC GGATCCTGCT CGAGGCGGGA
GCCTCCTTCG AGGCGCCGCC GCTGCTCGCA GTGTGCGGCC GCACCGCCGA GCACGTGACC
GCCGCATGGC ACGACCACGC CAGGACCGTC CTGGCGCGGG ACCTCACGCC GGCCCACCGG
CCGATCGTCT ACAACTCCTG GTACGCGACG ACGTTCGACG TGACGCCCGC CCACCAGCTG
AGCCTCGCGG AGGCGGCGGC GTCGCTCGGC GTCGAGGTGT TCGTCGTCGA CGACGGCTGG
TTCCGTGGAC GCGACCACGA CCGCGCCGGC CTCGGCGACT GGACGCCCGA CCCGCACGCG
TTCCCCGACG GCCTGGACCC CCTGGTCAGC GGCGTGACGG CGCTGGGGAT GCGCTTCGGG
ATCTGGATGG AGCCCGAGGC GGTCAACCCG GACAGCGACC TGTACCGGGA GCACCCGGAC
TGGGTGTACC GCGCGGGAGA CCGACCGCTC GTGACGCTGC GCCACCAGTA CGTGCTCGAC
CTCGGCCGCC CCGAGGTCGA GTCCTTCGTG CTCGACGCGG TCCGCGCCGT GCTGGCCGAC
GAGCGGATCA GCTACCTCAA GTGGGACATG AACCGGCCGG TCAGCGACGG CGGCCGGCCG
GGTGACCCGC ACGGGCGGGA GTGGGCGCTG CAGCACACGC ACGCCTACTA CCGGATCCTG
CGCGCGATCC GCGCCGAGTT CCCGCACGTG ACCGTCGAGG CGTGCTCGGG CGGCGGCGGC
CGGGTCGACC TCGCGGTGCT GGCCCTGACC GACGTGGTGT GGCCGAGCGA CGAGACCGGC
CCGCGGGACC GGCTCGCGAT CCAGCACGGA TTCCTCTCGG CGTACCCGCC GTCCGTCATG
AGCTCGTGGG TCACCGACGC GCCGGACATC CTCGACACGG ATCCCGCGAG CCTCGAGCTC
CGGTTCGTCG TCGCGATGGC GGGGGTGCTC GGCGTCGGGT CGGACCTGCT CGCGTGGGAC
GCCGCGACGC GGGAACGGGC GCGCGAGCTG GTGGCGCTGT ACGCCGACGT GCGCGACGTC
GTCCACACGG GCCACGTCGT CAGGCACGGC TCGCCGGCCG ACGACGTCTA CGCCGTCGAG
TACGGACCGA CGGCGGCCGG GAGGCCTGTG GTGCTCCTGG TGTACGGACG GCCGGGTCGC
GCGGCGGACG TCGCGCTGCC GCTCGCGACG CCGGATCCCG GGGCCAGGTA CCGGGTGCGC
TCGTCGGGCG AGGTGGTCTC CGGGGCCGAC GCCCGGGCCG GGCTGAGCGT CCCGTTCGCG
CTCGCGGACG ACGCGGACGT CGTCGTGCTC GAGCCGCTGT GA
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| Protein sequence | MDRPAWRLRT ASTTLELAAA PDELGPVLVD WYPDPASPGE ARAVPGAEGH GVGGFATPAD
RLPLLYTALG TRHTRAAELA VDHGSGLVGA RLRCTDVASA SLPDGGDELR ASFVDSTGHV
AVELDVVTHP EHDVVELRSR VTNTGDAPLV LDRALTAALA LPVGPGAVVD LLGGHWSREF
SPFRVDLPAG ELAIGSRQGI TSHTYSPVVT VTSRDPSERG LRTEGRAQED RDREHHRAYG
VALAWSGSWR MVVDAAPFRP DVRVSGGAGD DATRILLEAG ASFEAPPLLA VCGRTAEHVT
AAWHDHARTV LARDLTPAHR PIVYNSWYAT TFDVTPAHQL SLAEAAASLG VEVFVVDDGW
FRGRDHDRAG LGDWTPDPHA FPDGLDPLVS GVTALGMRFG IWMEPEAVNP DSDLYREHPD
WVYRAGDRPL VTLRHQYVLD LGRPEVESFV LDAVRAVLAD ERISYLKWDM NRPVSDGGRP
GDPHGREWAL QHTHAYYRIL RAIRAEFPHV TVEACSGGGG RVDLAVLALT DVVWPSDETG
PRDRLAIQHG FLSAYPPSVM SSWVTDAPDI LDTDPASLEL RFVVAMAGVL GVGSDLLAWD
AATRERAREL VALYADVRDV VHTGHVVRHG SPADDVYAVE YGPTAAGRPV VLLVYGRPGR
AADVALPLAT PDPGARYRVR SSGEVVSGAD ARAGLSVPFA LADDADVVVL EPL
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