| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0940 |
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| Symbol | |
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| ID | 7858161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 1056116 |
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| End bp | 1057441 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643865023 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_002880963 |
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| Protein GI | 229819437 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.558741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGA GCAGACTGAC CCGTCGCACG TTCATGGCGG GTGTGGCCGG CGCGGGAGCG
GCCGGCATGC TGACCGGCTG CGTCACGGGC GGTGGCGACG GCGGCGGCAA CGGAGGCGAG
GGCGAGGGGG GCGGCACCGG CGAGGACTCG GGCGACCCGT CCGGCCCGGT CACGATGCAG
ATCTCGTTCA CGGAGCCGAT CACGCGCGAC TCGCTCGAGA CGGTGGTCGA GTCGTACGAG
GGGGGCGACG TCACCGTCAA CGCCATCGCG ACGGAGCAGT TCCGCGCGCA GCTGTCGACG
TACCTGACGT CGTCGACCCC GCCGGACGTC ATCGGCTGGC TCGCCGGCTC CGTCGCCCGC
GACTACGCGG AGCAGGGGCT CCTCCTCGAC GTGGGCGACC TGTGGACGGG CGACGGCGCG
TGCGCGAACT TCTCCGACGC GCTGCGCAGC CTGTCCTCGA CCGAGGACGG CACGCAGATC
TTCGTGCCGA CCAGCTACTA CTGGTGGTCG GTCTTCTACT TCAAGTCCGC CTTCGAGGAG
TGGGGGGTGG AGCCGCCGAC CACCTGGGAC GACTTCATCG CCCTGTGCGA GAACCTCCAG
GGCCAGGGGG TGAACCCGCT GACGAACGGC ACCGGGTCCA CGCCGTGGAT GGCCTCGGGC
TGGTTCGACT ACCTGAACAT GCGCATCAAC GGTGCGCCGT ACCACCGGGA GCTGCTCGCC
GGCGAGCACG CGTTCACGGA TCCCGAGGTC GTGGCGGTGA TGGAGGAGTA CCGCCGACTC
ATCCCGTTCT TCGACCCGAA CAGCTCGTCG TACGCCGTGC AGGAGGCGGT GACGCCGCTC
GTCCAGAAGA CCGCAGGGAT GTACCTGGTC GGGGCGTTCA TCACGACGTC GATCCCCGAG
GACATGCTCG ACGACCTCGA CTTCTTCTCG GTGCCGCCCA TCAACCCGGA TGTGGCGAGC
GCGGAGGAGG CGCCGACGGA CGGGTACATG GGCAGCGCGA ACGCGCCGAA CGTCGCAGGG
GCGAAGGCGC TCATGTCGTA CCTGGCGTCG CCCGAGGCGC AGCAGGAGTA CATCGAGCTG
TCCGGATCCT CCAACCTCCC GACGTCGCCC GACGTCGACA CCTCGAGCTT CTCGCCGCTC
GTCCAGAAGG GTCTGGCGCT CCTGGAGGAG ACGGAGGAGA TCACCCAGTT CTTCAACCGC
GACTCGAGCG ACGAGCTGCA GCTCACCGCC GACGACGCGC TCACCCGGTT CCTCGACGAC
CCGTCCGACA TCCCGGCGAT CCTCGAGGGG TGGCAGACCG CCGCCGAGCG CGTCTGGGGA
TCATGA
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| Protein sequence | MSTSRLTRRT FMAGVAGAGA AGMLTGCVTG GGDGGGNGGE GEGGGTGEDS GDPSGPVTMQ
ISFTEPITRD SLETVVESYE GGDVTVNAIA TEQFRAQLST YLTSSTPPDV IGWLAGSVAR
DYAEQGLLLD VGDLWTGDGA CANFSDALRS LSSTEDGTQI FVPTSYYWWS VFYFKSAFEE
WGVEPPTTWD DFIALCENLQ GQGVNPLTNG TGSTPWMASG WFDYLNMRIN GAPYHRELLA
GEHAFTDPEV VAVMEEYRRL IPFFDPNSSS YAVQEAVTPL VQKTAGMYLV GAFITTSIPE
DMLDDLDFFS VPPINPDVAS AEEAPTDGYM GSANAPNVAG AKALMSYLAS PEAQQEYIEL
SGSSNLPTSP DVDTSSFSPL VQKGLALLEE TEEITQFFNR DSSDELQLTA DDALTRFLDD
PSDIPAILEG WQTAAERVWG S
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